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berkeley_reactor_200306_biofilm_scaffold_103592_151

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(146624..148156)

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate kinase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626CF3 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 496.0
  • Bit_score: 563
  • Evalue 1.10e-157
Carbohydrate kinase {ECO:0000313|EMBL:KDR27584.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 497.0
  • Bit_score: 604
  • Evalue 1.10e-169
Xylulose kinase similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 504.0
  • Bit_score: 526
  • Evalue 5.60e-147

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Taxonomy

Burkholderia grimmiae → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1533
ATGACCGCCCGTCCCTGCTTCATCGGCATCGACATCGGCACGTCGACCTGCAAGACCCTGGCGCTCGACGCCGACGGCGCGGTCGTGGCCCACGCCAGCGCGGACTATCCCCTGGTCACGCCGCGTCCCGGCTGGGCGGAGCAGGACCCCGAGCTGTGGTGGCAGGCGGCCGCGGCCACGGTCTCGGCCGTGACCGCGCAGCTCGGCGCCCATTGCGTCGAGGCGATCGGCCTCACCGGGCAGATGCACGGGCTGGTGCCGCTCGACGAAGAGGACCGCGTGATCCGCCCGGCCATGCTGTGGTGCGACCAGCGCGCCGCGCCGCAATGCCAGGCCCTCACCAGGCGGGTCGGCGGCCTGCCCGCGCTGCTCGCCCTGTCGAGCAACCGCATGTTGCCGGGCTTCACCGGCGGCAAATTCCTGTGGCTGGCCGAGCACGAGCCGGACGCCTTCGCCCGCATGCGCCGCTTCCTCAATCCCAAGGACTATCTGCGCCTGCGCATGACCGGCGTGCATGCCACCGACGTCTCCGATGCCTCCGGGACCGGCCTCCTGGACGTGCGCCGCCGCCGATGGTCGCCCGGGCTGCTCGCCGCGGCCGGGCTCACGGACGAGCAGGTGCCTGATGTGTTCGAGTCCACCGAGGTCACCGGCGGCCTCGCGCCCGAGGTCGCAGCCGCCTGGGGCCTGCCCGCCGGCCTGCCGGTGGTGGCCGGCGGCGGCGACTCCGTGCTGCAGACCACGTCGCAGGGTATCGTCGAGGCGGGCAGCATCGGCATCACCATCGGCACGGCGGGCATCGTCGGCGGCGCGGCCCGCCGCTGCCCGGACAATCCCGGCGGGCTGGTGCAGGTCTCCTGCGGCAACGCGCCGGACCGCTGGCACGTGATGGGCGTCTCGCTCAATGCCGGCGGCTCGTTCCAATGGCTGAAGGAGACGCTGGAGCCGCTGGCCCATGGCGAGCTCGGCTTCGACCGGCTGGCCGCGCTCGCCGGATCCGCCCCGGCCGGCGCGGCGGGCCTGATGTTCCTGCCCTATCTCATGGGCGAGCGCTGCCCGCATGTGGCGCCGGACGGCCGCGGTGCCTGGGTCGGCCTGACGCGCGGCCACGGGCTCGGCCACATGGCGCGGGCGGTGATGGAAGGCGCGCTGCTCAACATGCGGGCCATTCTCGATCTCTTCGCCGAGGCGGGCCTGGCCTGCGACCGGCTCCGCGCCTCGGGCGGCGCCACCGCGTCCCGCGTCTGGCTCGAGCTCCTCGCCGACGTCGCCGGCCGGCCGGTGGCGACCGTCTCCGGCGCGTCGGAAGGCGGCGCCTTCGGCGCGGCGCTGCTGGCCGGCGTCGGGGCGGGGCATTGGCCGAGCCTGGACGCGGCGGTCGGGGTGGTGCACGAGACCGGACGCGTCGACCCCGACCCCGGCCGCGCTCGGGTTTACGACGCCATCCACCCCATCCACAAATCGCTCTATGCGACCCTGCGGGCGACCTTCGCGGAACTTGCGATGCTGCCCGACGCAAAGGCCTCGGCATGA
PROTEIN sequence
Length: 511
MTARPCFIGIDIGTSTCKTLALDADGAVVAHASADYPLVTPRPGWAEQDPELWWQAAAATVSAVTAQLGAHCVEAIGLTGQMHGLVPLDEEDRVIRPAMLWCDQRAAPQCQALTRRVGGLPALLALSSNRMLPGFTGGKFLWLAEHEPDAFARMRRFLNPKDYLRLRMTGVHATDVSDASGTGLLDVRRRRWSPGLLAAAGLTDEQVPDVFESTEVTGGLAPEVAAAWGLPAGLPVVAGGGDSVLQTTSQGIVEAGSIGITIGTAGIVGGAARRCPDNPGGLVQVSCGNAPDRWHVMGVSLNAGGSFQWLKETLEPLAHGELGFDRLAALAGSAPAGAAGLMFLPYLMGERCPHVAPDGRGAWVGLTRGHGLGHMARAVMEGALLNMRAILDLFAEAGLACDRLRASGGATASRVWLELLADVAGRPVATVSGASEGGAFGAALLAGVGAGHWPSLDAAVGVVHETGRVDPDPGRARVYDAIHPIHKSLYATLRATFAELAMLPDAKASA*