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berkeley_reactor_200306_biofilm_scaffold_102636_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19292..20326

Top 3 Functional Annotations

Value Algorithm Source
Rcorf14 n=1 Tax=Agrobacterium rhizogenes RepID=A8VZU5_AGRRH similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 344.0
  • Bit_score: 535
  • Evalue 2.20e-149
Rcorf14 {ECO:0000313|EMBL:ABW33571.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 344.0
  • Bit_score: 535
  • Evalue 3.10e-149
ABC transporter; substrate-binding component similarity KEGG
DB: KEGG
  • Identity: 31.6
  • Coverage: 361.0
  • Bit_score: 163
  • Evalue 8.40e-38

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGGCGATGACATGGATCGGACGTCGAACGCTGCTCAAGAGCATGGCCGTGATCGCGGCCATGGCCCTGGGCGCATCCACGCAGGCCCGGGCGCAGGAGAGGGAGCTCATCCTCAGCGGCTTCGGCGGCGCCTATGACGAGGCAATGGCGCAGAGCGTCAAGGATTTCGAGAAGGCCAACGACGTCAAGGTCACGATCGTGGCCGGATCCGGGGCCAACAACATGGCGCGCGTCCGCAACAAGGAGATCGACGTCATCGTCTCCGATCCAGTCTTCGCGCTGCGCATGGAGGCGGAGGGCGCCTTCGCGCCGCTGGACCCGAAGCTGGTGCCCAATCTCGCCTCGCTCTACCCCAAGGCCATCTATTCGCCGGCGGTCGTCGCGGCCAATTTCGGCGCCTATGTCCTTGCCTACAATCCGGGCGAGGTGAAGCCGCCGCAGTCCTGGTACGATCTGGCCGATCCTCAGTACAAGGGGCGCGTCGCGTTGCGCGGCTTCCGGCCGGAGAACATCGAGCTGATCACCCTGTTCGCCAAGCTCGCGGGCGGCGACGAGCGTCATCCCGATGCCGGCTTCGCCGAGCTGGCCAAGATCGCCGGCAACATCGACGTCTGGATCAATGCCCACGCCGATCACCTCGAGCTCTATCGCAACGACCAGATCTCCATGAGCGTGTGGACCGACGGCCGCATCGCCTGGGCGCACGACGCCGAAGGCGTCAATGTCAAGGGCGCCATTCCGAAGGAGGGCTTCTTTCCGCTGGCCTCGACGCTGAGCGTGGTCGCCGGCCGCCCGAACACGGACCTGGCGGAGAAGCTCGCGAACCACCTGCTCGGCGCGCAGGCCGGCCTGATCATGGCGCAGAAGCTGGGCTATTTCCCCACCAACAAGCAGGCGGTCCTGCCGCCGGACGTGCAGGCCAAGATGATGCTCACGCCGCAGAACGTCGACAGCTTGCAGAGCGCCGACTGGAAATACATCGTGACCGTGTATGACGCGTGGCAGTCTCGGTGGGAGCGGGAAATCCAGAGATAA
PROTEIN sequence
Length: 345
MAMTWIGRRTLLKSMAVIAAMALGASTQARAQERELILSGFGGAYDEAMAQSVKDFEKANDVKVTIVAGSGANNMARVRNKEIDVIVSDPVFALRMEAEGAFAPLDPKLVPNLASLYPKAIYSPAVVAANFGAYVLAYNPGEVKPPQSWYDLADPQYKGRVALRGFRPENIELITLFAKLAGGDERHPDAGFAELAKIAGNIDVWINAHADHLELYRNDQISMSVWTDGRIAWAHDAEGVNVKGAIPKEGFFPLASTLSVVAGRPNTDLAEKLANHLLGAQAGLIMAQKLGYFPTNKQAVLPPDVQAKMMLTPQNVDSLQSADWKYIVTVYDAWQSRWEREIQR*