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berkeley_reactor_200306_biofilm_scaffold_127933_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18640..19314)

Top 3 Functional Annotations

Value Algorithm Source
Beta-lactamase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7H8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 224.0
  • Bit_score: 347
  • Evalue 9.50e-93
Transcriptional regulator {ECO:0000313|EMBL:ETR77747.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 224.0
  • Bit_score: 349
  • Evalue 3.50e-93
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 223.0
  • Bit_score: 327
  • Evalue 2.20e-87

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCGTGTGCTTCTGGTGGAAGACGAGCCGGAAATGGTTTCCGCGCTCCGCGCCGCCCTGATCCGACATGATATGATTGTCGACCGCGCTCCGAGCCTCGCCGAAGCGAAGGCGACCCTCGCCGAGGGTGTGCACGACGCGGTTCTGCTGGATCGGCAGTTGCCGGACGGCGATGGCCTGTCCCTGATCCCGATCCTGCGCGCCAGCGGCAACGCCGTGCCGGTGCTCGTCCTAACGGCGCGCGGCGATCTCGTCGACCGGGTCGCGGGCCTCGACAACGGCGCCGACGACTATCTCGGCAAGCCGTTCGCCTTCGAGGAACTGCTGGCGCGATTGCGCGCGCTCCTGCGCCGTCCGGCCCATGTGCAATCGGACATTGTCCGGGTGGCCCGGCTTTCGTTCGACTTCGGCCACAGCGAGGTGAGCGTCGAGGGGAAGCCGCTGGAAATGCCCCGCCGCGAACTTCTGGTGCTCGAGGCGCTGGTGCGGCGCATGGGCCGCATGGTGCTGCGCTCCTTCCTGATGGAAGCCGTCTTCGGCCTGGATGACGAGATCCAGTCCAATGCCCTCGACACGCATGTTTCGAGGCTGCGCCGCAAGCTCGCCGACGCGGATGCCGGCGTGACCATCAACGGCATTCGGGGTGTCGGATACCTCCTGCGCGAGACGCCATGA
PROTEIN sequence
Length: 225
MRVLLVEDEPEMVSALRAALIRHDMIVDRAPSLAEAKATLAEGVHDAVLLDRQLPDGDGLSLIPILRASGNAVPVLVLTARGDLVDRVAGLDNGADDYLGKPFAFEELLARLRALLRRPAHVQSDIVRVARLSFDFGHSEVSVEGKPLEMPRRELLVLEALVRRMGRMVLRSFLMEAVFGLDDEIQSNALDTHVSRLRRKLADADAGVTINGIRGVGYLLRETP*