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berkeley_reactor_200306_biofilm_scaffold_127933_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(23626..23979)

Top 3 Functional Annotations

Value Algorithm Source
Putative translation initiation inhibitor, yjgF family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CT72_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 117.0
  • Bit_score: 175
  • Evalue 2.00e-41
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:EJC83025.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 117.0
  • Bit_score: 175
  • Evalue 2.80e-41
endoribonuclease similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 117.0
  • Bit_score: 168
  • Evalue 6.80e-40

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGACCATCCAGCGTTTCGACACCGGCGCGCGCATGAGCCAGGCCGTGCTCCACGGCGGCTTCGCCTTCCTCGCCGGCCAGGTGGCGGAGGACGCGCCCGGCACCTCCGTGACCGAGCAGACCGCCAATATCCTGGCGCGGATCGACGCCCTGCTCCACCGCATCGGCTCGCGGCGGGAGAACATCCTCAGCGCCACGATCTGGCTCGCCGACATCGCCGGCTTCGCCGAGATGAATGCGGTCTGGGACGCCTGGGTGCCGCAAGGCCATGCTCCGGCCCGCGCCACGGTGGAGGCCCGGCTGGCCGCCCCGCAATTCGCCGTCGAGATCGGCATCGTCGCCGCCGTGGCCTGA
PROTEIN sequence
Length: 118
MTIQRFDTGARMSQAVLHGGFAFLAGQVAEDAPGTSVTEQTANILARIDALLHRIGSRRENILSATIWLADIAGFAEMNAVWDAWVPQGHAPARATVEARLAAPQFAVEIGIVAAVA*