ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_127933_32

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 36351..37502

Top 3 Functional Annotations

Value Algorithm Source
Putative glycosyl transferase, putative membrane-associated protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JIH7_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 373.0
  • Bit_score: 362
  • Evalue 3.70e-97
glycosyl transferase membrane-associated protein similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 373.0
  • Bit_score: 362
  • Evalue 1.10e-97
Putative glycosyl transferase, putative membrane-associated protein {ECO:0000313|EMBL:CCB66974.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 373.0
  • Bit_score: 362
  • Evalue 5.20e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGATCGGGCAGGCGCTCGCCCTCCTCTTCGGCGCGCTCGCCGTCGCCGGCTGCCTCTACACGCTGGTCGCGGCCCGGCTGGTGGCCCGCTTCGGCCGGCCGGAGCCGGCCGCTGCCGCCTCCGGCGCCGCCGTGACCGTGCTCAAGCCGCTGCACGGGGCCGAGCCGTTCCTGCACGAGAACCTGATGTCCTTCCTGGCGCAGGACCATGCCGGCCCGGTGCAGGTGGTGTTCGGCGTGCAGAATCCGCAGGATGCGGCGATTCCCGTGGTCGAGGCGATCATCCGCGCCATGCCGGAGCGCGACCTCGCCCTGGTCGTCGACGCCGCCCGCCACGGCTCCAACCCCAAGGTCTCGAACCTGATCAACATGATGGGCGCGGCGCGCCACGACGTGCTGGTCCTGGCCGACAGCGATATCCGCGTCGGGCCCGACTATCTCGCCCGGGTGGTCGCCGCGCTCGAGCGGCCGGGAATCGGCGCGGTCACCTGCCCCTATCGCGGCGGTGTCACGGACGGGCTGTGGTCGCGCCTCGCCGGGCTGCAGATCGACAGCCATTTCCTGCCGAGCGTCGTCGTCGGCCTCGCCGGCGGGCTCGCCGCGCCCTGCTTCGGCGCCACCATCGCGCTCCGGCGGCAGACGCTGGAGCGCATCGGCGGCTTCCGCGCCCTCGCCGACGTGCTGGCCGACGACTATGCCGTCGGCCATGCCGTCCGCGGCCTCGGGCTCGCCGTGGCGGTGACGCCCTTCCTCGTGACGCACCGCTGCAACGATGCCTCGCTGGCCGAGATGCTGCGCCACGAGATCCGCTGGGCCAAGACCGTCGCCGGCCTCGACCGGCTCGGCCATGTCGGCAGCGGCTTGACCCATCCCCTGCCGCTCGCCATCCTGGCCCTCTCGCTGACCGGCTTGTCCGGCGGCGCGGGGATTCTGGTCGCGGCGGCGTTTTTCTGCCGCAGTCTCCTGCTCTGGAGCGTGGCGCGGCGGTTCGGTTTGCAGGAAACGGCCTATGGCCTGCTCCCCCTGCGTGACTGCCTGTCGTTCCTGGTCTATCTCGCCAGTTTCGTGCCCACCGGCGTCCATTGGCGCGGGCACGATTTTCGGGTCAGGATGGACGGGACGATGGTGGCGAGACGAGAAGGTGATCGATGA
PROTEIN sequence
Length: 384
MIGQALALLFGALAVAGCLYTLVAARLVARFGRPEPAAAASGAAVTVLKPLHGAEPFLHENLMSFLAQDHAGPVQVVFGVQNPQDAAIPVVEAIIRAMPERDLALVVDAARHGSNPKVSNLINMMGAARHDVLVLADSDIRVGPDYLARVVAALERPGIGAVTCPYRGGVTDGLWSRLAGLQIDSHFLPSVVVGLAGGLAAPCFGATIALRRQTLERIGGFRALADVLADDYAVGHAVRGLGLAVAVTPFLVTHRCNDASLAEMLRHEIRWAKTVAGLDRLGHVGSGLTHPLPLAILALSLTGLSGGAGILVAAAFFCRSLLLWSVARRFGLQETAYGLLPLRDCLSFLVYLASFVPTGVHWRGHDFRVRMDGTMVARREGDR*