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berkeley_reactor_200306_biofilm_scaffold_127933_37

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(40610..43177)

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS43_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 864.0
  • Bit_score: 922
  • Evalue 2.70e-265
hopanoid biosynthesis associated RND transporter like protein HpnN similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 864.0
  • Bit_score: 922
  • Evalue 7.70e-266
Hopanoid biosynthesis associated RND transporter like protein HpnN {ECO:0000313|EMBL:ADJ22302.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 864.0
  • Bit_score: 922
  • Evalue 3.80e-265

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2568
ATGGTGGAAAGCCTGGTTCTCTCGGTCGTACGCGCTTGCGTGCGCCATGCTGTCGCCACCCTGATCCTCTCCATCCTCGTCGCCCTCGCCGCCGGTGCCTATGCGGCGACGCATTTTCGCATCAACACCAATTCGAGCGACCTGATCTCCCCCGACGTGGAATGGCGCCGGCACGAAGCGGCCTTCAACGATGCCTTTCCCAATCTGAGCGCCGAGGTCGTCGTGGTCGTCGACGCCAGGACGCCGGACCAGGCGGATGCGGCCGCCACCGCGCTCGGCGACCGGCTGTCGACCAAGACGGACGCCATCCGCCTGGTGCGCCAGGCCGGCGGCGGCGAGTTCTTCCGGCGCAACGGGCTGCTCTACCTCCCGACCGACGAGGTGAACCGCATCGTCGCGGCGCTGATGCGCTCGCAGGCCTTCCTGGGGCCGCTCGCGGCCGATCCGACGCTGCGCGGCCTCGGCAATGTCGTCTCCGGCATCGGCATGGGCCTGGCGGCGGGGCAGATCCCCAAGGACGCGCTGGACGAGAAGCCGCTCGCCGCCATGGCCGACGCCGTCGAGGCCGGGCTTGCCGGCCGCGCCGGCACCTTCTCCTGGGCCGGCCTGACGGAAGGCCAGGAGGACCAGAGCGGCACGCGCCGCCTCCTCCTGGTGCGCCCGGTGCTCGATTTCAGCGATCTGCAGCCCGGCCACCTCGCCACCGACACGATCCGCGCCGCCGCAAGGGACCTCGGCCTGACGCCGGAGAACGGCGTGACCGTGCGCCTGACCGGCGACGTGCCGATGGCCGACGAGGAGTTCGGCACGCTCGCCGAAGGCGCCGAGCTCAACGGCGTGATCACCCTCCTGGTGGTGCTGTTCATCCTCTGGCTGGCGCTGCATTCGAGCCGCATCATCCTGGCGGTGATGGTCAGCCTCGTCGTCGGCCTCATGGTCACCGCCGCGCTCGGGCTCCTGATGGTCGGCGCGTTCAACCTGATCTCGGTCGCCTTCGCCGTGCTGTTCGTCGGACTGGGCGTCGATTTCGGCATCCAGTTCAGCGTGCGCTACCGCGAGGAGCGCCACCTCGACGACGACCTCACCACCGCGCTGCACCACGCGGCGCTCAAGGCCGGCCGGCCGCTCGCCCTGGCGGCGGTGGCGGTGGCGGCCGGCTTCTATTCCTTCCTGCCGACCTCCTATCGCGGCCTCTCCGAGCTCGGCCTGATCGCCGGCACCGGCATGATCGTCGCCTTCGTCACCAGCATCACCGTGCTGCCGGCGCTGATCCGGCTGCTGCGGCCGGCCGGCGAGCCGGCCGCGGTCGGCTTCCTGTTCCTGGCGCCGGTCGACCGCTTCACCGCCCGTCACCGCATGCCGATCCTGTTCGGCACGCTCGCGGTGGTGCTCGCCGGGCTGCCGCTGCTCTGGCATGTCCGCTTCGACTTCAACCCGATCCACCTGCGCAGCGCCGCGGTGGAATCGGTTTCGACCTTCATCGACCTCACCCGCGATCCCGACACCAGCCCGGCGACCATCCAGATCCTGCGCCCGACCCTTCAGGCGGCCGAGGAGACCGCCGCCACGCTCGAGAAGCTGCCCGAGGTCGGGCGCACGGTGACGCTGGCCTCCTTCGTGCCGGACCATCAGGACGAGAAGCTCGCGGCCATCGCCCAGGCCGCGGCGGCGCTGGAGCCGGTGCTGGCCGCCCCGGCCGTGCCCACGCCCACGGATGCCGACAGCGCCGCGGCGCTGCGCCAGGCGGCGCAGGTGCCCGGCGGCCAGGGTGGCGCCCTCGGCCGGCTGGCCACGGCGCTCGGCAAGCTGGCGGAGGCCACGCCCGAGACGCGCGCCCGGCTGCAGAAGGCCCTGTTCGCCGGCCTGCCGCCGATGCTGGCGCAGCTCAAGGACAGCCTGCAGGCTTCGCGCGTGACGCTGGACAACCTGCCGCCCAGCATCCGGGGCGACTGGACCACGCCGGACGGGCGGGCCGCGGTTCAGGTCTATGCCAAGGGCGATTCCAACGACAATGCCACGCTGCGCCGCTTCGCCGCGGCGGTGCGGGCCGCCGCGCCGGACGCGACCGGCTATCCCGTCACCATCCAGGACGCCGGCGAGACCATCGTCCAGGCCTTCTTCCAGGCCGGCGCGCTGGCGCTCGTCAGCATCACCATCCTGCTGTTCGTCGTGCTGAAACGCGTCACCGACGTGCTGCTCACCCTGGTGCCGCTGCTGCTGGCCGGCGTGGTGACGCTGGAGCTCACGGTGCTGCTCGACCTGCCGCTCAACTTCGCCAACATCATCGCCCTGCCCCTGCTGCTCGGGGTCGGCGTCGCCTTCAAGGTCTATTTCGTCATGGCCTGGCGCGCCGGAGAGCGCAGCCTGCTCGCCTCCAGCTTGACGCGGGCGGTGTTGTTCAGCGCCGCGACCACGGCCGCCGCCTTCGGCAGCCTGTGGTTCTCGCACCATCCCGGCACGTCGAGCATGGGCGAGTTGCTGGCGCTGTCCCTGCTCTGCACCATGGCCGCCGCCGTGCTGTTCCAGCCGATCCTGATGGGCCCGCCCCGGCAGGCGAAGGCGGCGTGA
PROTEIN sequence
Length: 856
MVESLVLSVVRACVRHAVATLILSILVALAAGAYAATHFRINTNSSDLISPDVEWRRHEAAFNDAFPNLSAEVVVVVDARTPDQADAAATALGDRLSTKTDAIRLVRQAGGGEFFRRNGLLYLPTDEVNRIVAALMRSQAFLGPLAADPTLRGLGNVVSGIGMGLAAGQIPKDALDEKPLAAMADAVEAGLAGRAGTFSWAGLTEGQEDQSGTRRLLLVRPVLDFSDLQPGHLATDTIRAAARDLGLTPENGVTVRLTGDVPMADEEFGTLAEGAELNGVITLLVVLFILWLALHSSRIILAVMVSLVVGLMVTAALGLLMVGAFNLISVAFAVLFVGLGVDFGIQFSVRYREERHLDDDLTTALHHAALKAGRPLALAAVAVAAGFYSFLPTSYRGLSELGLIAGTGMIVAFVTSITVLPALIRLLRPAGEPAAVGFLFLAPVDRFTARHRMPILFGTLAVVLAGLPLLWHVRFDFNPIHLRSAAVESVSTFIDLTRDPDTSPATIQILRPTLQAAEETAATLEKLPEVGRTVTLASFVPDHQDEKLAAIAQAAAALEPVLAAPAVPTPTDADSAAALRQAAQVPGGQGGALGRLATALGKLAEATPETRARLQKALFAGLPPMLAQLKDSLQASRVTLDNLPPSIRGDWTTPDGRAAVQVYAKGDSNDNATLRRFAAAVRAAAPDATGYPVTIQDAGETIVQAFFQAGALALVSITILLFVVLKRVTDVLLTLVPLLLAGVVTLELTVLLDLPLNFANIIALPLLLGVGVAFKVYFVMAWRAGERSLLASSLTRAVLFSAATTAAAFGSLWFSHHPGTSSMGELLALSLLCTMAAAVLFQPILMGPPRQAKAA*