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berkeley_reactor_200306_biofilm_scaffold_127933_39

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 44476..45279

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS41_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 267.0
  • Bit_score: 438
  • Evalue 3.70e-120
hopanoid biosynthesis associated radical SAM protein HpnH similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 267.0
  • Bit_score: 438
  • Evalue 1.10e-120
Putative radical SAM protein {ECO:0000313|EMBL:CCB66979.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 267.0
  • Bit_score: 438
  • Evalue 5.20e-120

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
GTGGGCATTCCTTTCAACCAGATGGCGCGAATCGGCGCCTATATCCTCGGCAACGAGATCCGCGGCACCAAGCGCTATCCGCTGGTGCTGATGCTGGAGCCGCTGTTCCGCTGCAACCTCGCCTGCGCCGGCTGCGGCAAGATCGACTATCCCGCCGAGATCCTGAACCAGCGGCTCTCGGTGGCGGACTGCCTCGGCGCGGCCGAGGAATGTCCCGCTCCGGTGGTGGTCATTGCCGGCGGCGAGCCGTTGCTGCATCGCGAGCTGCCCGAGATCGTCGAGAAGCTGCTGGCCCGCGGCAAGTTCGTCACCGTCTGCACCAATGCGCTGCTGATGGAGAAGAAGCTCGGGCAGTACAAGCCGCACAAGAACTTCAACTGGTCCGTGCATCTCGACGGCGACAAGCCGATGCACGACAAGTCGGTCTGCCAGACCGGCGTCTACGACAAGGCGGTGGCTGCCGTCCGCGCCGGCAAGGCGGCGGGCTTCCGCGTCAACATCAACTGCACCCTGTTCAACGACGCCAAGCCCGAGCAGGTCGCGGCCTTCCTCGACACGCTGAAGCCGCTCGGCGTCGACGGCATCACCATCTCGCCCGGCTATGCCTATGAGCGGGCGCCGGACCAGCAGCACTTCCTCAACCGCAAGACCACCAAGACGCTGTTCCGCGAGGTGCTCAAGCGCGGGCGCGGCGGCCGCAACTGGGAGTTCTTCCAGTCCGGCCTGTTCCTGGATTTCCTCGCCGGCAACCAGACCTATCACTGCACGCCCTGGGGCAACCCGACCCGCACCGTGTTCGGCTGA
PROTEIN sequence
Length: 268
VGIPFNQMARIGAYILGNEIRGTKRYPLVLMLEPLFRCNLACAGCGKIDYPAEILNQRLSVADCLGAAEECPAPVVVIAGGEPLLHRELPEIVEKLLARGKFVTVCTNALLMEKKLGQYKPHKNFNWSVHLDGDKPMHDKSVCQTGVYDKAVAAVRAGKAAGFRVNINCTLFNDAKPEQVAAFLDTLKPLGVDGITISPGYAYERAPDQQHFLNRKTTKTLFREVLKRGRGGRNWEFFQSGLFLDFLAGNQTYHCTPWGNPTRTVFG*