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berkeley_reactor_200306_biofilm_scaffold_127933_43

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(48266..49540)

Top 3 Functional Annotations

Value Algorithm Source
Squalene-associated FAD-dependent desaturase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U918_METS4 similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 414.0
  • Bit_score: 510
  • Evalue 9.40e-142
squalene-associated FAD-dependent desaturase similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 414.0
  • Bit_score: 510
  • Evalue 2.70e-142
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:ACA20612.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 414.0
  • Bit_score: 510
  • Evalue 1.30e-141

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Taxonomy

Methylobacterium sp. 4-46 → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGCGGGCCGGCACCGTCCATGTCGTCGGCGCCGGCCTCGCCGGCCTGTCCGCCGCCACGAGGCTCGCCGAGCGCGGCTTCGCCGTGACCCTGCACGAGGCGGCGCCGCAGGCAGGCGGGCGCTGCCGCTCCTATGTCGACCAGACGCTCGGCACCACCATCGACAACGGCAATCACCTCGTCCTCTCCGGCAATGCCGCCGCCCTCGCCTATCTCGACCGCATCGGCGCCCGCGACCAGCTCGCCGGGCCGGCGGAGGCCGCCTTCGACTTCGTCGACATCCGCGACGGCCTGACATGGCGGATCCGGCCCAGCCCCGGCCGGCTGCCCTGGTGGATCCTCGATCCCTCCCGGCGCGTGCCGGGAACGCGGCCGCTCGACTATCTCGCCCTGCTGCGCCTGCGCTTCGCCCGGCCGGACGCGCGCATCGGCGAGGTCATCGCCTGCACCGGCCCGCTCTACGAGCGGCTGTGGCATCCCCTGCTGCTGGCGGCCCTCAACACCGAGCCGCCATCGGCGAGCGCCCGGCTCGCCGACGCGGTGATCCGCCAGACGCTGGAGCGCGGTGGCGAGGCCTGCCGCCCGCTGGTGGCGCGCGAGGGCCTCTCGGCCGCCTTCGTCGAGCCCGCCCTCGCCTTCCTGGCGCGGCACGGGGCGCAGATCCGCTTCGGCAGCCGGCTGCGCGCCCTCACCCTCGACGGCGGCCGGGCTGCGGCGCTGGCCTTCGCCGAGGACGCGGTGGCGCTGGCACCGGGCGACCGCGTGGTGCTGGCCGTGCCCGCCCCGGTCGCAGCCCAGCTCCTGCCCGGCATCGCCACGCCGGTGCAGCACCGCGCCATCGTCAACGGCCATTTCCTGTTCGAGCCGCCGGCCGGCATGCCGCCCTTTCTCGGCGTGGTCGGCGGCGAGGCCGAATGGATCTTCGCCTATCCCGGCCGGATCTCGACCACCACCAGCGGCGCCGACCGGCTGCTCGAGGAGCCGCGCGAGGCGCTGGCGGAGCGGCTCTGGCGCGACGTCCAGGCAGCGCTGGGGTTGAAAGCGACCCTGCCGGCATGGCAGATCGTCAAGGAGCGGCGCGCCACCTTCGCCGCCCTGCCGGCCGAGGCGGCCCGGCGGCCGCACGCGGCGACGCGCTGGTCCAACCTGGTGCTGGCCGGCGACTACACTGCCACCGGCCTGCCGGCGACGATCGAAGGCGCGATCCGCTCGGGCATGACCGCGGCGGACGCCATCGAACAGGCGGACGGGCGCGCCGGTGTCGCGGCCGCGTAG
PROTEIN sequence
Length: 425
MRAGTVHVVGAGLAGLSAATRLAERGFAVTLHEAAPQAGGRCRSYVDQTLGTTIDNGNHLVLSGNAAALAYLDRIGARDQLAGPAEAAFDFVDIRDGLTWRIRPSPGRLPWWILDPSRRVPGTRPLDYLALLRLRFARPDARIGEVIACTGPLYERLWHPLLLAALNTEPPSASARLADAVIRQTLERGGEACRPLVAREGLSAAFVEPALAFLARHGAQIRFGSRLRALTLDGGRAAALAFAEDAVALAPGDRVVLAVPAPVAAQLLPGIATPVQHRAIVNGHFLFEPPAGMPPFLGVVGGEAEWIFAYPGRISTTTSGADRLLEEPREALAERLWRDVQAALGLKATLPAWQIVKERRATFAALPAEAARRPHAATRWSNLVLAGDYTATGLPATIEGAIRSGMTAADAIEQADGRAGVAAA*