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berkeley_reactor_200306_biofilm_scaffold_127933_45

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(50370..51245)

Top 3 Functional Annotations

Value Algorithm Source
Phytoene synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UI80_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 294.0
  • Bit_score: 339
  • Evalue 3.40e-90
Phytoene synthase {ECO:0000313|EMBL:EJW13284.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 294.0
  • Bit_score: 339
  • Evalue 4.70e-90
squalene synthase similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 293.0
  • Bit_score: 333
  • Evalue 5.20e-89

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGATGGACACGGCTTCCTCCGCCAGGACCGGCAAGGGCTCGGGCGACGAGAATTTTCCCGTCGCCTCGCGGCTGATCGCACCGCGGCACCGGCCGGCGATCCTGGCCTTCTACAACTTCGTGCGCACGGCGGACGACGTCGCCGACCACGCCACCCTGGCGCCGGAGGAGAAGCTGCGCCTCATCGACCAGCTCGAAGCCGGTCTCGCCGGCCGCAGCGAGGCCGAGCCGGCGGCACGGGCGCTGCGGGCGGTGCTGCAGGACCGCGGCCTGTCGCCGCGCCATGCGCTCGACCTCCTCGACGCCTTCCGCCTCGACGTGCGCAAGGCGCGCTATGCGAGCTGGGACGAGCTGATCGACTATTGCCGCCTGTCGGCCATGCCGGTCGGGCGCTACGTGCTCGATCTGCACGGCGAAAGCCAGGCCCTCTGGCCGGCGAACGATGCCCTCTGCGCGGCGCTGCAGGTGATCAACCACCTGCAGGATTGCGGCAAGGATTTCCGGGCCCTCGACCGCGTCTACATCCCGCTCGACGCCCTGTCCGCCGCCGGCGCCGACGTCGCCGCGCTCGGCGGCGACCGCGCATCGCCGGCCTTGCGCCGCTGCCTCGCCGCCCTGGCCCAGCGCGCCGGCCGGCTGCTCGACGAGGCGCAGGCCTTCCCGGCCGGCATCCGCGACGGGCGGCTGTCGCTGGAGGTCGCGGTGATCCATCGTCTCGCCCGCAAGCTGGTCGGGCTCATCGAGCGGCGCGATCCCATCAGCGAGCGCGTGCACATCGGCAAGGCCGGCGCCCTCGGCGTGGTCGCCGCCGTGCTGGCCGAGCGGGTCCTGCGCGGCCCCGGGCGGCGGGCGGCCGAGATCGGGCAGCCGACATGA
PROTEIN sequence
Length: 292
MMDTASSARTGKGSGDENFPVASRLIAPRHRPAILAFYNFVRTADDVADHATLAPEEKLRLIDQLEAGLAGRSEAEPAARALRAVLQDRGLSPRHALDLLDAFRLDVRKARYASWDELIDYCRLSAMPVGRYVLDLHGESQALWPANDALCAALQVINHLQDCGKDFRALDRVYIPLDALSAAGADVAALGGDRASPALRRCLAALAQRAGRLLDEAQAFPAGIRDGRLSLEVAVIHRLARKLVGLIERRDPISERVHIGKAGALGVVAAVLAERVLRGPGRRAAEIGQPT*