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berkeley_reactor_200306_biofilm_scaffold_127933_56

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(59970..60689)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIW8_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 234.0
  • Bit_score: 287
  • Evalue 1.20e-74
cytochrome c-type biogenesis protein CcdA (DsbD analog) similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 234.0
  • Bit_score: 288
  • Evalue 1.20e-75
Cytochrome c-type biogenesis protein CcdA (DsbD analog) {ECO:0000313|EMBL:BAQ18768.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 234.0
  • Bit_score: 288
  • Evalue 6.00e-75

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Taxonomy

Methyloceanibacter caenitepidi → Methyloceanibacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGCACCGGCCCCGGCCTGGCGCTGCTGGCGGGCGTGCTGTCGACGCTCTCGCCCTGCGTGCTGCCGCTGCTACCGATCGTGCTGGGCACGGCCGCGGAGGAGCACCGGCTCGGCCCGGCGGCGCTCGCCTGCGGCCTCGCCCTCTCCTTCGTCGGCATCGGCCTCTTCGCGGCCACCATCGGCTATGCCGTCGGCATCGAGGAGGGACCGCTGCGCATGCTGGCCGCCGCGGCGATGGCCGGGTTCGGCCTGGTGCTGCTGGCCCCGCCCCTGCAGGCCGGGCTCGCCGCCGCGGGCGGGCCGCTCGGCAACTGGGCGCAGGAGCATCTCGTCCGCTGGCCGCGGCAAGGCTGGCTCGGCCAGCTCATGGTCGGCCTGCTGCTCGGCATCGTGTGGAGCCCCTGCGTCGGCCCGACCCTGGGCGCGGCGTCCGTCCTCGCCGCCCGCGGGCAGGACCTGGCCGAGGTCGCCCTGACCATGGCGCTGTTCGGCCTGGGCGCGGCCGCCCCCCTCATGCTGCTCGGCTCGCTGTCGCGGCGCGCCCTGATGCGCTGGCGCGGCCGCCTCGCCGGGCCGGGCGCGGGCCTGCGCGGCCTGTTCGGCCTCACGCTGGTGGCGATGGGCGGCGCGGTGATCGTCGGCCTCGACCGGCGCCTCGAGGCCTGGCTGGTCGCCGCCTCGCCGGACTGGCTGACCACGCTCACCACGCGGTTCTGA
PROTEIN sequence
Length: 240
MRTGPGLALLAGVLSTLSPCVLPLLPIVLGTAAEEHRLGPAALACGLALSFVGIGLFAATIGYAVGIEEGPLRMLAAAAMAGFGLVLLAPPLQAGLAAAGGPLGNWAQEHLVRWPRQGWLGQLMVGLLLGIVWSPCVGPTLGAASVLAARGQDLAEVALTMALFGLGAAAPLMLLGSLSRRALMRWRGRLAGPGAGLRGLFGLTLVAMGGAVIVGLDRRLEAWLVAASPDWLTTLTTRF*