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berkeley_reactor_200306_biofilm_scaffold_126567_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(7060..8004)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7V975_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 295.0
  • Bit_score: 273
  • Evalue 1.90e-70
Transcriptional regulator LysR {ECO:0000313|EMBL:GAN78074.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 314.0
  • Bit_score: 396
  • Evalue 3.50e-107
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 295.0
  • Bit_score: 273
  • Evalue 5.30e-71

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGGACCGCGGTGACCTTGCGAGCCTGACCGCCTTCGTTGCCGTGGCCGACCAGCGTAGCTTCCGGGCGGCCGCCTCCCGCCTCGACGTCACGCCCTCGGCGCTCAGCCATGCCATGCGGCAGCTGGAGGAGCGGCTCGGGGTGCGGCTGCTGCACCGCACGACACGCAGCGTCTCGGTGACGGATGCCGGCCGGCGCCTGCTCGACCAGCTGCGTCCGGCCATCGACCAGATCACCGGGGCTCTCGCCGATCTCGGCCAGGAGCGCTCCCGCCCGATGGGGCGCCTGCGCATCTATGCGGCGGGCCATATCGCCGCCACCACGGCGATCGTGCCGGTGTGGGACCGCTTCCTGTCGACCTATCCGGACGTCAATCTGGAGATCCATGTCGGCGACGGGCCGATCGACATCGTCGACCGGGGGTTCGATGCCGGCATCGGCCCGCACGACCATGCGCCGGCCGACATGATGGCCGTGCGCGTCGTGGGGCCGATGAAGGTGGCCATCGTCGGCGCGCCGTCCTATTTCGCGCGCCGGCGTCCGCCACGCACGCCCGACGACCTCGCACGCCACACCTGCGTCCAATATCGCCTCGCCATGGACGGCAGCGTGATGGAATGGCCCCTGGCCCGCAACGGCCAGACCCGGCGCATGGCGACCGAGGGCCGCATCACCGTCAACGAGGTCGAGCTTGCCGCCCGCGCCGCCATCGACGGCCTCGGCATCGCCCTCACCTTCGAGCCCTTCGCCGAGCCGTTCCTGCGCTCGGGCCAGCTCGTCCGGGTGCTCGAGGACTGGTCGCCGACCTTCGAGGGCTTCTACCTCTATTATCCCGGCCACCGCCAGGTCCCCGCCGCGCTGCGCGCCTTCATCGACATGGTGCGCGCCGCCCGCGGCGCGCCGCTGGTCAAGTGCCCGCTGGAGAACCCCTTCACCCGCTGCTGA
PROTEIN sequence
Length: 315
MDRGDLASLTAFVAVADQRSFRAAASRLDVTPSALSHAMRQLEERLGVRLLHRTTRSVSVTDAGRRLLDQLRPAIDQITGALADLGQERSRPMGRLRIYAAGHIAATTAIVPVWDRFLSTYPDVNLEIHVGDGPIDIVDRGFDAGIGPHDHAPADMMAVRVVGPMKVAIVGAPSYFARRRPPRTPDDLARHTCVQYRLAMDGSVMEWPLARNGQTRRMATEGRITVNEVELAARAAIDGLGIALTFEPFAEPFLRSGQLVRVLEDWSPTFEGFYLYYPGHRQVPAALRAFIDMVRAARGAPLVKCPLENPFTRC*