name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_126567_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..396)
|
Probable potassium transport system protein kup n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PRS9_9BRAD
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
K potassium transporter
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
789..2495
|
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ftfL; formate-tetrahydrofolate ligase (EC:6.3.4.3)
formate--tetrahydrofolate ligase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000362B0E1
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2594..2980)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJP7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41029.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
MFS transporter
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2990..3517)
|
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
hypoxanthine phosphoribosyltransferase n=1 Tax=Methylobacterium sp. 77 RepID=UPI00037CB3AB
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EIM29582.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
|
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berkeley_reactor_200306_biofilm_scaffold_126567_5
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3525..4337)
|
Putative Zinc finger/thioredoxin n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TC53_9RHIZ
Putative Zinc finger/thioredoxin {ECO:0000313|EMBL:ESR23903.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_6
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4588..5271
|
Cell division ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HZP8_AZOC5
ftsE; cell division ATP-binding protein
Cell division ATP-binding protein {ECO:0000313|EMBL:BAF90609.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
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berkeley_reactor_200306_biofilm_scaffold_126567_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5274..6218
|
cell division protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000376CD2B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA16655.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
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berkeley_reactor_200306_biofilm_scaffold_126567_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6328..7035
|
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IB86_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS65279.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7060..8004)
|
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7V975_STEMA
Transcriptional regulator LysR {ECO:0000313|EMBL:GAN78074.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
LysR family transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_10
unknown
|
Not on your lists |
comp(8091..8405)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_126567_11
unknown
|
Not on your lists |
comp(8546..8791)
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_126567_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9033..9806
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003765E1C
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:KFC73143.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phospholipid/glycerol acyltransferase
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_13
unknown
|
Not on your lists |
9839..10186
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_126567_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10387..10677
|
50S ribosomal protein L28 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=RL28_RHOP2
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
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berkeley_reactor_200306_biofilm_scaffold_126567_15
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10918..13056)
|
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FTN6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ERP87731.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
methyl-accepting chemotaxis sensory transducer
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_16
unknown
|
Not on your lists |
13410..13655
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_126567_17
unknown
|
Not on your lists |
13720..13953
|
This feature has no annotations |
|
berkeley_reactor_200306_biofilm_scaffold_126567_18
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14101..14709
|
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EME4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52072.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_19
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14881..16251
|
Efflux transporter, RND family, MFP subunit n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LB12_BURGS
mdtA; multidrug resistance protein MdtA
RND transporter MFP subunit {ECO:0000313|EMBL:KHD21036.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16277..19375
|
Acriflavin resistance protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YKC1_9BURK
Multidrug transporter {ECO:0000313|EMBL:KGM32473.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
acriflavin resistance protein
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_21
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19372..22668
|
nodulation protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003470A5B
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ADX54740.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_22
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22665..24158
|
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EN17_METSB
NodT family RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACK49152.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_23
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24125..25285)
|
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4NN64_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ83242.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_24
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25359..26225)
|
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A66A7
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP18302.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
alpha/beta hydrolase family protein
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_25
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26350..27579)
|
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003141683
MFS transporter {ECO:0000313|EMBL:KDP71318.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
major facilitator protein
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_26
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27698..28321)
|
GCN5-related N-acetyltransferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UMS3_METS4
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACA18561.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_27
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28461..28736)
|
50S ribosomal protein L27 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAT4_STAND
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
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berkeley_reactor_200306_biofilm_scaffold_126567_28
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(28875..29540)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003811E1F
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
50S ribosomal protein L21
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_29
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29734..30174)
|
Putative acetyltransferase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C238_9RHIZ
Putative acetyltransferase {ECO:0000313|EMBL:EIM75890.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_126567_30
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30265..30873)
|
HupE/UreJ protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5M665_9RHIZ
HupE/UreJ protein {ECO:0000313|EMBL:EJT01060.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
HupE/UreJ protein
|