ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_126567_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19372..22668

Top 3 Functional Annotations

Value Algorithm Source
nodulation protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003470A5B similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 1090.0
  • Bit_score: 1460
  • Evalue 0.0
acriflavin resistance protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 1115.0
  • Bit_score: 1456
  • Evalue 0.0
Acriflavin resistance protein {ECO:0000313|EMBL:ADX54740.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 1115.0
  • Bit_score: 1456
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia sp. CCGE1001 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3297
GTGAGCAGCAACCTCTCCGCCCTGTTCATCCGCCGGCCGGTGGCCACGACGCTCCTGACCATCGGCATCGCGCTGGCGGGCGCCTTCGCCTTCGGCCAGCTGCCGGTCTCCCCGCTCCCCCAGGTCGACTTTCCCACCATCTCGGTGCTGGCGACCATGCCCGGCGCCAGCCCGGACACCATGGCCGCCACCGTCGCCGCTCCGCTCGAACGCCATCTCGGCCAGATCGCCGACGTCACCGAGATGACCTCGCAGAGCTCGCTGAGCAACACCCGGGTGACGCTGCAGTTCGGGCTCGACCGGGACATCGACGGGGCGGCGCGCGACGTCCAGGCGGCGATCAACGCCGCCCGGGCGGACCTGCCGACCAGCCTGCGCGCCAACCCGACCTACCACAAGATCAACCCGGCGGATTCGCCGATCATGGTCGTCGCCCTGAGCTCGCCGACCCGCACCCAGGGACAGCTCTACGACGCGGCCTCGAACGTGCTGCAGCAGAGCCTGTCCCAGCTCAAGGGCATCGGCGAGGTCGACGTCGGCGGCAGCGCCCTGCCGGCCGTGCGCGTCGAGCTCAATCCCGGCGCCCTGTTCAAGTACGGCATCGGCCTGGAGGACGTGCGCGCCGCCCTCGCCTCGGCCAACGCCAACAGCCCCAAGGGCGCGGTCGAAACCAAGGACTTCCACTACCAGATCTACACCAACGACCAGGCGAGCCGGGCCGCGCAATACCGCGACCTGGTGGTCGCCTACCGCAACGGCGCGGCGGTGCGCCTCACGGATCTCGGGCATGTCGACGATTCGGTGGAGGACCTGCGCAACGCGGGCCTGGCCAACGGCAAGCCCTCGGTGCTGGTCATCCTCTACCGCCAGCCGGGCGCCAACATCATCGAGGCGGTCGACGCGGTGAAGGCCGAGCTGCCGCGCATGGCCGCCGCGCTGCCCGGCGACGTCACCCTCAGCATCGGGCTCGACCGCTCCAAGACGATCCGCACCTCGCTGACCGACACCGAGCACACGCTGATCATGTCGGTCGCCCTGGTCACGCTCGTCGTCTTCGTGTTCCTGCGCAACCTGCGCTCGGCCGCCATCCCCAGCATCGCGGTGCCGGTCTCGATCATCGGCACGTTCGGAGCGATGTACCTCCTCGGCTTCAGCCTGGACAACCTGTCGCTGATGGCGCTGACGATCTCGACCGGCTTCGTGGTCGACGACGCCATCGTCGTCCTGGAGAACATCGCCCGCCATATGGAGCTGGGGGCGACGCGCCTCGAGGCTGCGCTCGTCGGGGCGCGCGAGGTCGGGTTCACCGTGGTCTCGATCAGCATCTCGCTGGTGGCGGTGTTCCTGCCCATCCTGCTGATGGGCTCGATCATCGGCCGGCTGTTCCGCGAGTTCGCCATCACCCTGTCGATGGCCGTGGCCATCTCGCTGTTCATCTCGCTCACCGCGACGCCGATGATGTGCTCGCGCTTCCTGCCCAACCCCGCCGACCATTCCAACGGCTGGTTCTACCGGGTGACCGAGCGCGGCTTCGAGGCCATGCAGTCCTTCTACAGCCGGACCCTCGCGGTGGCGCTGCGCCACTCGCTGCTGGTGGCGCTCGTGCTCCTGTCCACCATCGGCCTCAACGTCTATCTCTTCTCCGACATCGCCTACGGCCTGTTCCCGGCCCAGGACACCGGCCTGCTGATCGGCGGCATCCAGGCCGACCAGAGCATCTCCTTCCAGGCGATGGCGCAGAAGTTCACGCAGCTCCAGACCATCGTCCAGGCCGATCCGGCGGTGGACAACGTCATGGGCTTCACCGGCGGGCGCCAGACCAATTCCGGCTTCATGTTCATCTCGCTCAAGCCCCTGGCCGAGCGCGGCATCTCGGCCGACATGGTGGTCGGCCGGCTGCGCGGCAAGCTGGCGCAGGTGCCCGGCGCGCGGCTGTTCCTGCAGCCGGCGGCCGACCTGCGCACCGGCGGGCGCCAGAGCAACGCGGCCTACCAGTTCACGCTGCAGGCCGACGAGACCAAGGTCCTCAACGAGTGGGCGCCGCGCCTGACCGAAGCGATGCAGCGGATCGGCGTCATCACCGACGTCAATTCCGACCAGCAGCAGGGCGGCCTCGAGACCGACCTCGTCATCGACCGGCCGACGGTGGCGCGCCTCGGCCTGACGCTCAACGCCATCGACAACACGCTCTACGACGCCTTCGGCCAGCGGCAGGTGTCGACGATCTACAGCGCCCTCAACCAGTACCACGTGGTGATGGAGGTGGAGCCGCGCTACTGGCAGTCGCCGGAGACGCTCAGGGACATCTGGGTCTCGACCTCGGGCGCCAATCCCTCGGGCACCCAGAGCACCAACGCCGCGGCGGGCACGTTCTCGGCCTCGACGGTGACGACCACGACGGCCGCGACCATCGCCGCCGATTCCGCCCGCAACCTGGCGATCAACTCGATCGCGACGGTCGGCAATGCCAGCGCCTCGGCCGGCGCCTCCGTGTCGACCAACCAGGAGACGATGGTGCCGCTGGCCGCCTTCGCGCGGTTCCAGGCCGGGCTGACGCCCCTCTCGGTCAACCACCAGGGCCCGTTCGTCGCGACGACCATCTCCTTCAACCTGGCGCCGGGCCATGCGCTCAGCGAGGCCCAGGCCGCGATCGAGCAGGCCATGGCCGACATCCATATGCCCGCCGCGGTCCACGGCTCCTTCGCCGGAACCGCCGCGACCTACCAGCAGTCCCTGGCCAACGAGCCCCTGCTGATCGCGGCCGCCCTCATCGCCGTCTACATCGTGCTGGGCATCCTCTACGAGAGCACCATCCATCCCCTGACCATCATCTCGACCCTGCCCTCCGCCAGCGTCGGCGCCCTGCTCGCGATGAAGATGTTCGACATGGAGTTCACCATCATCGCCCTGATCGGCATCATCCTGCTGATCGGCATCGTCAAGAAGAACGCCATCATGATGATCGACTTCGCCCTGCAGGCGGAGCGCCGGGGCCTCGCCCCGCCGGAGGCGATCTTCGAGGCCTGCCTGCTGCGCTTCCGGCCGATCATGATGACCACCTTCGCGGCGCTGCTCGGCGCGCTGCCGCTCGCCTTCGGCACCGGCGAGGGATCGGAGCTGCGCCATCCCCTCGGCCTGTCGATCGTCGGCGGCCTGATCGTCAGCCAGGCGTTGACCCTCTACACCACGCCCGTCATCTATCTCTATCTCGACCGGTTCAACCGCTGGCTGCACCGCCTGTGGAACCGGTTCTATCTCGGGCAGCGCGGTGCCGGTCTCGCGGGAGGGCCATCATGA
PROTEIN sequence
Length: 1099
VSSNLSALFIRRPVATTLLTIGIALAGAFAFGQLPVSPLPQVDFPTISVLATMPGASPDTMAATVAAPLERHLGQIADVTEMTSQSSLSNTRVTLQFGLDRDIDGAARDVQAAINAARADLPTSLRANPTYHKINPADSPIMVVALSSPTRTQGQLYDAASNVLQQSLSQLKGIGEVDVGGSALPAVRVELNPGALFKYGIGLEDVRAALASANANSPKGAVETKDFHYQIYTNDQASRAAQYRDLVVAYRNGAAVRLTDLGHVDDSVEDLRNAGLANGKPSVLVILYRQPGANIIEAVDAVKAELPRMAAALPGDVTLSIGLDRSKTIRTSLTDTEHTLIMSVALVTLVVFVFLRNLRSAAIPSIAVPVSIIGTFGAMYLLGFSLDNLSLMALTISTGFVVDDAIVVLENIARHMELGATRLEAALVGAREVGFTVVSISISLVAVFLPILLMGSIIGRLFREFAITLSMAVAISLFISLTATPMMCSRFLPNPADHSNGWFYRVTERGFEAMQSFYSRTLAVALRHSLLVALVLLSTIGLNVYLFSDIAYGLFPAQDTGLLIGGIQADQSISFQAMAQKFTQLQTIVQADPAVDNVMGFTGGRQTNSGFMFISLKPLAERGISADMVVGRLRGKLAQVPGARLFLQPAADLRTGGRQSNAAYQFTLQADETKVLNEWAPRLTEAMQRIGVITDVNSDQQQGGLETDLVIDRPTVARLGLTLNAIDNTLYDAFGQRQVSTIYSALNQYHVVMEVEPRYWQSPETLRDIWVSTSGANPSGTQSTNAAAGTFSASTVTTTTAATIAADSARNLAINSIATVGNASASAGASVSTNQETMVPLAAFARFQAGLTPLSVNHQGPFVATTISFNLAPGHALSEAQAAIEQAMADIHMPAAVHGSFAGTAATYQQSLANEPLLIAAALIAVYIVLGILYESTIHPLTIISTLPSASVGALLAMKMFDMEFTIIALIGIILLIGIVKKNAIMMIDFALQAERRGLAPPEAIFEACLLRFRPIMMTTFAALLGALPLAFGTGEGSELRHPLGLSIVGGLIVSQALTLYTTPVIYLYLDRFNRWLHRLWNRFYLGQRGAGLAGGPS*