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berkeley_reactor_200306_biofilm_scaffold_131415_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6404..7189

Top 3 Functional Annotations

Value Algorithm Source
YvrD n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D053_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 262.0
  • Bit_score: 359
  • Evalue 1.60e-96
Dehydrogenase with different specificity {ECO:0000313|EMBL:EDQ34928.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 262.0
  • Bit_score: 359
  • Evalue 2.30e-96
YvrD-like short-chain dehydrogenase/reductase similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 262.0
  • Bit_score: 337
  • Evalue 2.50e-90

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Taxonomy

Hoeflea phototrophica → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGGATCTGAACCTGAAGGGCAAGCGCGTCCTCGTCACCGGATCGGCCTCCGGCATCGGGCGCGCCACGGCGGCAGCCTTCCTGCGCGAAGGCGCCGAGGTGGTGATGAACGGCCTCACCGAGGCCGAGGTCGCCGCGGCGCTGGCGCAGCTGAGCCCGCTCGGCCCGGTCCGAGGCCTCGCCGCCGACATCGCCACGGCGGACGGAGCCGAGGCGCTGCTGGCCTTCGCCGGCGCCGGCGGGGTCGACGTGCTGGTCAACAATGTCGGGATCTTCTCGGTGAAGCCCTTTGCCGAGGTGACCGATGCGGAATGGCTGCATACTTTCAACGTCAACGTGCTCACCGCCGTGCGGATGAGCCGGGCGATCCTGCCTGACATGCTGGCGCGCGGCACCGGCGCAATCGTCAACCTCGCCTCGGAAGCCGGGGTGAAGCCTCTGCCGCAGATGGTGCATTATTCCGTCACCAAGACCGCGATGATCGGCCTCACCCGCGGCCTCGCCGAGCTGACCAAGGGCACGGCCGTCACCGTCAACGCCGTGCTGCCCGGCCCGACCTGGACCGAGGGGGTGGAGGCCTATTTCCGCGGCCTCGCCATGGCCAAGGCTGCGCCGATCGACGGCATCATCGGCAACTATTTCCGCGAGGACGAGCCGACCTCGCTGATCCAGCGCTTCGTCCGGCCCGAGGAGGTGGCGCGCATGATCGCCTTCGTCGCCGCCTCGCCCGCCGCCAATGGCGGCGCCTACCGCATCGAAGGCGGCATCATCCGCAGCATCCTCTGA
PROTEIN sequence
Length: 262
MDLNLKGKRVLVTGSASGIGRATAAAFLREGAEVVMNGLTEAEVAAALAQLSPLGPVRGLAADIATADGAEALLAFAGAGGVDVLVNNVGIFSVKPFAEVTDAEWLHTFNVNVLTAVRMSRAILPDMLARGTGAIVNLASEAGVKPLPQMVHYSVTKTAMIGLTRGLAELTKGTAVTVNAVLPGPTWTEGVEAYFRGLAMAKAAPIDGIIGNYFREDEPTSLIQRFVRPEEVARMIAFVAASPAANGGAYRIEGGIIRSIL*