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berkeley_reactor_200306_biofilm_scaffold_131415_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11704..12924)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X5Z9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 394.0
  • Bit_score: 240
  • Evalue 3.00e-60
Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family {ECO:0000313|EMBL:EFF77782.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 394.0
  • Bit_score: 240
  • Evalue 4.10e-60
capsule polysaccharide export inner-membrane protein similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 355.0
  • Bit_score: 223
  • Evalue 6.20e-56

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Taxonomy

Achromobacter piechaudii → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
TTGCGGACGAGGAAGATCCTGTGGCTGACGACGGCGACTTTATTTAACGCTCTGCCGACCTCGGCCAGGCGGGCTTCGGATGCGGAACTGGCCTATGACTCCAGGATTCGTCGTCGACGGGCGAAGCTGAGAAAATGGCTTCTGAGCCTGCTGATCCTGTTTGCTCCGCTGGCAGTTACCGTCATCTACAAATTCGCCATCTCCGTACCGATGTACGTTTCGGAAGTTCGGTTCGGGATCCGTGGCGGAACGGCTGCACAGAATCCGAGTTCTTCTTCGTCCGGCGGCACGTCCCTGTCGTCGATCGCCTCGCAGCTCGGCGGCGCCGTCGACGGCTATGCGGTGCGAGACTTTCTCTCGTCGCGCGACGCGATGAAGGAGCTCGACCAGAAGATCGATTTCGGCGAGCGGATGAAAAACCCCGGGCCCAGCCTGCTCGACCGCCTGCTGAATCGCTCTCCGAGCGACAAGGAATATGATCTCTATCAGTCGGCTATCGACGTGCGCTTCAATCTGTTGGAGCAGACGGTCGCCATGCGGGTCTACGCCTACTCGCCGGCGGACGCGCAGACGATGGCATCAAATCTCTTGAGTATTTCCGAGACATTCCTGGATAAGATGAACGTGAGATCTCGCCGGGACTGGCTTCGCCTGATGGAAAACGAAGTCAAGCAGGCAGAAGACCAGCTCTCAGATGCACGGACGGCTTTGGCCGACTGGCAGACGAAGAACGGAAACGTCGACCCGGTCGCCAGCATACAGATGCTGAACACGATTCTGGGACAGATCGAGACGTCGATTGCCACGGCTCGCGTCAACCTCGCCCAGTTCGTCGGCCTCGGCAGCGACACGAGCCCGCGGCAACGGGCGATCCAGGGTCAGATCGCGGCTCTGATGGAGCAGGAACGATCCATCCGCGACCGGCTCGCAGGTTTGAACAATTCGCAGGCTGGGCAATTGATGCAGTTCGAAAAGCTCAAGGCGAATGCAGATTTTGCAGAGAAGAATCTTTATGCTGCTCGGTCATCCCTCGAGGACGCTCGGGTCGAGTCGGCGCGTCAACAAAAATATGTCGAGGTTTTCGCTTCGCCATCACAATCGGAATCGGTGGCATTTCCCGATACGTTCGCTCTTTTTTCCGGAGCCCTGGTGGTCGGCGCCTCATTGTTGTTCCTCGGCTCTCTGACGGTCGGACTGGCGCGAGATGCGCTTGCCCGTTAG
PROTEIN sequence
Length: 407
LRTRKILWLTTATLFNALPTSARRASDAELAYDSRIRRRRAKLRKWLLSLLILFAPLAVTVIYKFAISVPMYVSEVRFGIRGGTAAQNPSSSSSGGTSLSSIASQLGGAVDGYAVRDFLSSRDAMKELDQKIDFGERMKNPGPSLLDRLLNRSPSDKEYDLYQSAIDVRFNLLEQTVAMRVYAYSPADAQTMASNLLSISETFLDKMNVRSRRDWLRLMENEVKQAEDQLSDARTALADWQTKNGNVDPVASIQMLNTILGQIETSIATARVNLAQFVGLGSDTSPRQRAIQGQIAALMEQERSIRDRLAGLNNSQAGQLMQFEKLKANADFAEKNLYAARSSLEDARVESARQQKYVEVFASPSQSESVAFPDTFALFSGALVVGASLLFLGSLTVGLARDALAR*