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berkeley_reactor_200306_biofilm_scaffold_131415_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13923..16058)

Top 3 Functional Annotations

Value Algorithm Source
Capsule polysaccharide export protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HUM6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 703.0
  • Bit_score: 475
  • Evalue 7.30e-131
Capsule polysaccharide export protein {ECO:0000313|EMBL:EJN06068.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 703.0
  • Bit_score: 475
  • Evalue 1.00e-130
capsule polysaccharide modification protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 713.0
  • Bit_score: 439
  • Evalue 1.60e-120

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2136
ATGCATCAACTCGATCGATCCGACGGGATTTCTCGTCCGTCGTGGCTTCCCCTGCAAGGGGCCAAGATTGGAGTGGCCGCCTCGGTCCTCCGTTCAGTGCCGCATCTCGCGCTGTTTCTGGAAACGCAATCTCTCCACGTGCGGTCGACCCTGACCTCACGGCTGGATGGCGTCGTCGGCTGGGGGCAGGGCATGTCGGCCTTGCGCGGCCTGGCCTTTGCCGCCCAGTCCAGGCTGCCCTTCTGGGTGCTCGAGGACGGCTTCCTTCGCTCCGTCGGCCTCGGCAAGCAGCAGGCGCGCGCCTTTTCCCTGATCATCGACGACCTCGGCGTCTATTATGATGCCTCCTGCCCTTCGCGCCTGGAAGCCATCATTGCGAACGAGGATTCGGCCTGGCTGGCGGCCCTGGGGCGCGCCGCGCGGGAACGGGTCGTGTCCGACCGGCTGACCAAGTACAATCACCTGCCGGACCGCCCCGTGGCTCTGGCGGCCGGGGGACAGGCCCGGATCCTGCTCGTCGATCAGGTGGCCGGCGATCGCTCGATCGCCGGTGCCTTGGCAAGCCAGAACGACTTTCGGCGCATGATCGATACGGCACGTCGTGATCGGCCGGGAGCACGCCTCATCGTGCGCGTTCATCCCGACGTCACCGCCGGCCTTGCGGCGGGCGTGCTGACCACCTTGGCGCAGGAAGACGGGTTGGAGGTGCTCGACGACCTGGTGTCGCCGCACGCCGTGCTGGACGTCGTCGACGAGGTCTGGACGGTGTCGAGCCAGCTCGGCTTCGAGGCCATGATGCGCGGCATCCCCGTGACCGTGTTCGGTGTCCCCTTCTATGCGGGATACGGTCTCACCGATGATCGTCCCGACAATACATCGGCGAGCGCCGCACTGGCCCGGCGAGCTGCCCTGAGGCCCTCGCTCGATGCGCTGGTGGGAGCGGCCCTGGTGCGCTACCCGCGCTATGTCGACCCGGTCCGTGAGCGCATCGCGACCTTCGACGAGGCGGCCGACCGCCTCGTCGCAGAACGACGTCGGCATCTTTCGCTGCCGGATCGCGCGGTCTGCGCCGGTTTCTCGCCTCTGAAACGGCGGATCGTCCGAAGGCTGCTGGGTGGGCCCGGCAAGAGCATCATGTTCGCCGGCCTGAGATCGGCCCTGGATCTCGCCCGGGCCAAGCAGGCGGCGGTCTGCATAGACGAGACGGAGACCGGCCAGTCCGCCGAAGTCGAGGTGCGAGCGGCCGGCACGCGGGTGTTGCGGCTGCAGGAGGGGTTCCTGCGCGCGACGGGGTTCGACCCGCAGGCCGCCATCCCGCCCCTGTTCTGCGTGAACGTCCAGTCGAGCCTCGCGGCCGCGCAGGATGACAGCGATCTCGTGCGCCTTCTGGCCGCGACGGAGCTGCCGCCGGCGCTCGTCGCCCGGGCCCGGGCGCTGCGCGAAACCATCATGCGCCGCGCCGCGACCGCGAACGGCAGGCTGCTGACGCCGGATCTGCGCAAGCGCCTCGCCGACCTGCGGCAACGAGCGGAGGGGAAAAAGGTCATCCTGGTTCCCGAACCCATGGAGGTCGACGCATCGTCCGCCAGCGGATCTCCGGCCGTAAGATCGACCGCCGCCCTTCTGGAAGCGGTGCGTGCCGACAGGCCGGATCATTTCCTCGTCTACAAGGCCCATGCCGATGTGGCGACCCGGAACCGGGCCGCCGGGCGGGGATGGGAAGAATTGCGCGATCTTGCCGATGCCGCGATCGCCGATGGACCGATCCTGCCATTGATCGATCTTGCCGACGAAGTTCACGTCCTGTCCTCGCCCGCGGGCTTCCAGGCCCTCCTGTACGGCAAGCCGGTGGTCACCTGGGGAACGCCCTTCTTCGCCGGCTGGGGCGTCACGGAGGACCGGCTGATTCGACCGCGGCGCAGGCTCTCCCTTGACGAGTTGACCGGGGCAACCTTGATCCTGTACCCCCACTATATCTATCCTCGTACGCTGCTACCGTGCGAACCGGAGGATCTCATCGCCTTCGAGGACGAGCAGGCCGTCAAGTACGGCGCATTCCCGCAGCCGATTGCGCAATTCGTGCGCAGCGCCGAATATTCGCTTCGAATGACCGGCATACGTCTGCCCCGGTTCTGA
PROTEIN sequence
Length: 712
MHQLDRSDGISRPSWLPLQGAKIGVAASVLRSVPHLALFLETQSLHVRSTLTSRLDGVVGWGQGMSALRGLAFAAQSRLPFWVLEDGFLRSVGLGKQQARAFSLIIDDLGVYYDASCPSRLEAIIANEDSAWLAALGRAARERVVSDRLTKYNHLPDRPVALAAGGQARILLVDQVAGDRSIAGALASQNDFRRMIDTARRDRPGARLIVRVHPDVTAGLAAGVLTTLAQEDGLEVLDDLVSPHAVLDVVDEVWTVSSQLGFEAMMRGIPVTVFGVPFYAGYGLTDDRPDNTSASAALARRAALRPSLDALVGAALVRYPRYVDPVRERIATFDEAADRLVAERRRHLSLPDRAVCAGFSPLKRRIVRRLLGGPGKSIMFAGLRSALDLARAKQAAVCIDETETGQSAEVEVRAAGTRVLRLQEGFLRATGFDPQAAIPPLFCVNVQSSLAAAQDDSDLVRLLAATELPPALVARARALRETIMRRAATANGRLLTPDLRKRLADLRQRAEGKKVILVPEPMEVDASSASGSPAVRSTAALLEAVRADRPDHFLVYKAHADVATRNRAAGRGWEELRDLADAAIADGPILPLIDLADEVHVLSSPAGFQALLYGKPVVTWGTPFFAGWGVTEDRLIRPRRRLSLDELTGATLILYPHYIYPRTLLPCEPEDLIAFEDEQAVKYGAFPQPIAQFVRSAEYSLRMTGIRLPRF*