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berkeley_reactor_200306_biofilm_scaffold_131415_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 22548..23723

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate export ABC transporter transmembrane component n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U6Z0_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 405.0
  • Bit_score: 194
  • Evalue 1.40e-46
sugar ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 405.0
  • Bit_score: 194
  • Evalue 3.90e-47
Polysialic acid transport protein kpsM {ECO:0000313|EMBL:CKH39789.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 405.0
  • Bit_score: 194
  • Evalue 1.90e-46

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Taxonomy

Achromobacter xylosoxidans → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGATGTATTTGTCGATTCTACTGCGAGCTGTTCTCGGTTTGAATCCGAACAACTTGACGACTCGACGCTTGGCCTATGAGGAAACAGCGAGCGCCCTCAGCCGCGTGCTGGCGGATGGCGGGTTCGACGAGATCGAGGTCGCGCTGCAGGAGCAACTCCTGACTCTTGCGATCCGGCAAGTCGAGGCGGATATCCGCAACGGTGTCGATATCACATCGCCGGACTACTACCCGACCGCATTGGCAGAGGCGGAGTATCGGGCCAAGGAGCGCGCGGCTCTTCTGCGCAAGAAAAGTGGCGCGGCCAATCTCGGCGGCGAGCCGGATCCGAGCATTGTGAAGCGCGCCGCCAGCGTGATGGAGCGACTCAAAGTTCTGGATCAGCTCAGCGCTTTTTCATGCGGCGCGGCGGACAGGCCATCGCGTATTTCTGTCATATACGCTTTGCTGATCCGATCAATTCATAATATTGCGGCCGACAGTAAGATTGCGATCGTCTGGGTTGTCCTTGAGCCGGCCTTTCTCATCGCGTTCATTGTCGCGATGTATTGGCTTGTCGGCTCACACCAGATCATGAATATGGACATTGCGCCTTTCGCCGTAACCGGAAGCGTTTCATGGGGGCTGTTGCGCGCATCGAGCGTGCGAGTGGGGTCGGCCATGCTGCGCGCCCGCGACGTCCTGAACCTTCCCCCCGTCTCGCCATTCGATGTCGCGATGACGGAGGCTCTCGTCAGCCTGCTGATCTATAGCGGTGTATTCGTCGTCGCCATCGGCTTCGTATTGGTGCTTGGACTTGGCGATCCGCCAGATGATCTTTTGAACGTCGTCAAATATTGGCTCGGCCTTTGGGTGGCGGCGACTGGCGTCGGGCTCATGTTCAGCTACTTCTTCTTGCACTGGTCTTACGGCAAACGAATTATTCCCGTTGCATGGAGAGGTGTCAGTCTGGTTTCCGGCGTGCTCTTCGTATCGGAGCAGTTTCCGGAAGACGTGAAGGGTTACCTGCTGATGAACCCGATCCTGCACGGCATCCAGCTCATGCGCGACGCCTATTTCGCCGGTTACAAGACGGTTGAGGCTAGTGCGCTGTACTTTTTCTGCTCGGCGGTGTTGATGCTGATGGTCGGCATGGCTTGCGAGCGTCGGAGCAGGCGCATGATCGCTCCGGGCTGA
PROTEIN sequence
Length: 392
MMYLSILLRAVLGLNPNNLTTRRLAYEETASALSRVLADGGFDEIEVALQEQLLTLAIRQVEADIRNGVDITSPDYYPTALAEAEYRAKERAALLRKKSGAANLGGEPDPSIVKRAASVMERLKVLDQLSAFSCGAADRPSRISVIYALLIRSIHNIAADSKIAIVWVVLEPAFLIAFIVAMYWLVGSHQIMNMDIAPFAVTGSVSWGLLRASSVRVGSAMLRARDVLNLPPVSPFDVAMTEALVSLLIYSGVFVVAIGFVLVLGLGDPPDDLLNVVKYWLGLWVAATGVGLMFSYFFLHWSYGKRIIPVAWRGVSLVSGVLFVSEQFPEDVKGYLLMNPILHGIQLMRDAYFAGYKTVEASALYFFCSAVLMLMVGMACERRSRRMIAPG*