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berkeley_reactor_200306_biofilm_scaffold_131415_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(25606..27669)

Top 3 Functional Annotations

Value Algorithm Source
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:KCB43598.1}; EC=2.4.-.- {ECO:0000313|EMBL:KCB43598.1};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 687.0
  • Bit_score: 396
  • Evalue 5.90e-107
Capsular polysaccharide biosynthesis protein n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W6F3_BORPA similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 626.0
  • Bit_score: 389
  • Evalue 5.10e-105
wbpT; capsular polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 626.0
  • Bit_score: 389
  • Evalue 1.40e-105

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Taxonomy

Bordetella hinzii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2064
ATGCAACGTGCTCGACGCCTCTACAGCATTCGAGGTTTCACCGCCAGACTGCGAGAATGGAAGCGTGACGACCCGGTCACCGCGGCAATCCGGCGAGGCCGCAGGAACGGCGGGAAGCCGGGCGAGCTGCCGGCGCATGTCGTCGCTCCCAGCATCGACCTCGACATCGAGTCCGGTCGGCTCGATCCGGCCGAGGCCATGGGCCCCCTGCTGCGCCTCATCGAAGAATATCCGGAATCCGACCAGCTCTACATTGCGGCGGCCCGAATCCTGGATCGCATCGACCGGAAGGCCGCCCGGCGCGTCTGGAAGAAGTTCTTCGAAAGGATCTCGATAACCCTGGAAGGCTACCGCCGCACGCTGCGGATGCAGACGGCGATTCGCGGCCGCGAGGCGACCTTGGAGGCGCTTCATGCCAGCTCCGACGATTCGCGATCCCTGGAGCTCCTGCTCTGCCGAGGCGTCGGCTACGAGATGCTCGGGGAGGCGGACCATGCCGACGCCTGCTTCCGCGACCTTCTCGCATTCCACCCGGATGTGGAGATCGTGCATCGGGAATATTGCAGGCTGCTGGTGACGCGGGGCCTGCTCGTCGACGCCGTGCAGGCTCTCGAGGAGGCGATCGAGCGGTTTCCCTCCGCCAATTGGTTCTCCCGAAAGCTGGGGACGGTGCGCGGCAGCATCGACGATGTCGAAGCCCTCGCGCCGGGAGAGCTGACGGCCGGTCGACCTGCCTCCCTCGTCGTCCTGCAGCGGATCCTGGATGATCTGATCGCCGAGCGGACGGACCCTCCGGCGAAGCCCTATCTCGGACGCAGCCTCCTGCTAACCTCGACGCTGGGCCCGGGGGGAGCGGAACGCCAGCTCGTCAACACCGCCCTGGCGCTGCACGCGGCCATGACCGAGCGTCGCACCATCGGCGGCCTGCAGATGGTCGGACCGCTGGTCGTCGGCGTCAGGCAGACCGGCGGGCAGCAGGACAACGACTTCCATCTCTCCGCGCTGGCCCGGGCCGGCGTGAGCGTGTTCGAATACGGACGCTGGCCGGCGGCGGGCGGCGATGGCGACCTGTCGATCACGGCAAGGTATGGGCACCACATGCGCTTTCTGCCGCGTCAGATGGCGGAAGGGATCTCGAAGCTCGCCGACTGGCTCGCCTGGCAGTCGCCGGATGTCGTGCAGATCTGGCAGGACGGCACCATCTATGCGACGGCGCTCGCGGCGCTGATCGCCAGGGTGCCGCGCATCGTGCTGATGGTCAGGACATTGCCGCCGATCGATCGGCGCGACCGCCTCAAGCCCGAGTACGAACTGCTCTACCGCAGGCTTCTGGCCGCTCCCGGCGTCGTCCTGGCCGCCAACGCCGCGGCGACGGCCCGGCGGTACGAAGAATGGCTCGCGCAGCCCGCCGGCCGCGTCCGCGTTCTGAGGAACGGCATCTCCTTCGTCGACCGGGATGCGCCTGCCGATGTGCGGGGCCTCGCCGAGGCTTTCGACCGGCAGACCGGGCATGGGTTCACCGTCGGCTGCGTGATGCGCGTCGACGAGAACAAGCGCCCGCTGGACTGGATTCGCATCGCCGCAGGCCTGGCGGAGCACGAGCCGACGAGCCGCTTCATCGTCGTCGGTGACGGGCCCCTGCTCGGCGCGATGCAGGCCTATGCGGAGCGCATCGATCTGGGGCCCCGGATCCTGTTCGTCGGCCGCTCGCAGCATGTCGGCTTCTGGTACACGCGCTTCGACCTGCTCATGCAGCTGTCCCGTCATGAGGGGCTGCCGAACTCCGTCATCGAAGCGCAGGTCCTCGGCATTCCCGTCATGGCGACCGCTGCCGGCGGCTCGGCGGAAGCGGTCCAGCGCGGCGTCACGGGCGAGCTGATCGACGACGTCGACGTCCTGCCCTACACGGCCATCGTCGAAAAGCTCGTCCGGCTGGCGCGCGCGCCCGAACGACGCGCAAGGATGGGAGAGGCGGCCAGGGCCTGGGCCGGCCGTGCCTTCTCGATCGAGGCGATGCTCGCGAACACCGCGTCGCTGCTCTCGGACGGTGGTCCCCGAACCTGA
PROTEIN sequence
Length: 688
MQRARRLYSIRGFTARLREWKRDDPVTAAIRRGRRNGGKPGELPAHVVAPSIDLDIESGRLDPAEAMGPLLRLIEEYPESDQLYIAAARILDRIDRKAARRVWKKFFERISITLEGYRRTLRMQTAIRGREATLEALHASSDDSRSLELLLCRGVGYEMLGEADHADACFRDLLAFHPDVEIVHREYCRLLVTRGLLVDAVQALEEAIERFPSANWFSRKLGTVRGSIDDVEALAPGELTAGRPASLVVLQRILDDLIAERTDPPAKPYLGRSLLLTSTLGPGGAERQLVNTALALHAAMTERRTIGGLQMVGPLVVGVRQTGGQQDNDFHLSALARAGVSVFEYGRWPAAGGDGDLSITARYGHHMRFLPRQMAEGISKLADWLAWQSPDVVQIWQDGTIYATALAALIARVPRIVLMVRTLPPIDRRDRLKPEYELLYRRLLAAPGVVLAANAAATARRYEEWLAQPAGRVRVLRNGISFVDRDAPADVRGLAEAFDRQTGHGFTVGCVMRVDENKRPLDWIRIAAGLAEHEPTSRFIVVGDGPLLGAMQAYAERIDLGPRILFVGRSQHVGFWYTRFDLLMQLSRHEGLPNSVIEAQVLGIPVMATAAGGSAEAVQRGVTGELIDDVDVLPYTAIVEKLVRLARAPERRARMGEAARAWAGRAFSIEAMLANTASLLSDGGPRT*