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berkeley_reactor_200306_biofilm_scaffold_131415_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(29409..30692)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetyl-D-galactosamine dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002D33FD4 similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 422.0
  • Bit_score: 556
  • Evalue 1.50e-155
GDP-mannose dehydrogenase {ECO:0000313|EMBL:KKC34569.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 427.0
  • Bit_score: 565
  • Evalue 5.90e-158
GDP-mannose dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 430.0
  • Bit_score: 547
  • Evalue 2.60e-153

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Taxonomy

Devosia psychrophila → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
TTGAACGAGAACCCGAATATTGCCGTTATCGGTCTTGGCTACGTCGGATTACCGCTCGCGATCGCCTTTTCGCGAAAGGGCTACAAGACCATCTGCTTCGACATCGATCGCTCACGCATTGAGGAACTGCGGCGCGGACATGACCGCACGATGGAGTTTCAGCCGCACGAGCTGGAAGAGGCGCGGCCATCCTTCACCGACGCTCCGGCCGACCTTCAGCCGGCAAACATCTATGTCGTCACCGTGCCGACGCCGGTGGACAGCGCCCGCCAACCGGATCTTCGCGCTCTTCTTTCGGCGTCCCGGACGATCGGCAAGGCCCTGTCGAAAGGCAATATCGTCGTCTATGAATCGACGGTTTTTCCCGGCGCGACCGAGGAAGAGTGCGTTCCTGTCCTGGAACGCGAATCCGGCCTGACCTGCGGCGTCGATTTCACGGTCGGCTATTCTCCCGAACGGATCAATCCCGGCGACAAGCAGCATCGCCTCGAGGATATCTGCAAGGTTGTCGCCGGCCAGGACGAACGCACCAGGGACATCCTGGCGTCCATCTACGGGTCCATCATCAAGGCCGGAATTCACCTCGCGCCTTCGATCAAGGTCGCGGAAGCGGCCAAGGTGATCGAGAATTCCCAGCGCGACATCAACATCGCCTTCATGAACGAGCTGTCGGAGATTTTCGAAAGGCTCGGCATCGATACCGGGGATGTTCTGACGGCAGCGCGGACAAAGTGGAATTTTCTGCCGTTTTTCCCGGGCCTGGTCGGCGGACACTGCATCGGCGTCGATCCCTACTACCTGACCTACCGTTCGGAGCGCGAGGGGTATCACCCCCAGGTCATCCTGTCGGGCCGCCGGATCAACGACAATGTCAGCCAGCGCATCGCGCGCGAATGTGTGCGCATGCTGCTGCAATCGGGAACCCCGGCGGCGCGGGTGGCCATGCTCGGCCTGACCTTCAAGGAGAACGTGCCCGACCTGCGCAATTCGAAGGCTGCCGACGTCGTCCTGGAGCTCCGCAGGTTCGGAATCACCGTCGACGTGGCGGATTCGCTCGCCTCGTCCTCCGACGCCCAGCATGAATACGGCATCTCCCTCACGCCGGTCGGCGACATGGCGAAGGCGGATGCGGTCATCGTCGCGGTTGCGCATCGCGACTATATCGAGGGCGGCTGGGACCTCGTGACGTCCCTGCTGAAGGACGGCCGTGGGATCGTCATGGACGTCAAGGGAATCCTCGACCGCTCGACGAAGCCCGACGGCGTGAAATTGTGGCGGTTGTAG
PROTEIN sequence
Length: 428
LNENPNIAVIGLGYVGLPLAIAFSRKGYKTICFDIDRSRIEELRRGHDRTMEFQPHELEEARPSFTDAPADLQPANIYVVTVPTPVDSARQPDLRALLSASRTIGKALSKGNIVVYESTVFPGATEEECVPVLERESGLTCGVDFTVGYSPERINPGDKQHRLEDICKVVAGQDERTRDILASIYGSIIKAGIHLAPSIKVAEAAKVIENSQRDINIAFMNELSEIFERLGIDTGDVLTAARTKWNFLPFFPGLVGGHCIGVDPYYLTYRSEREGYHPQVILSGRRINDNVSQRIARECVRMLLQSGTPAARVAMLGLTFKENVPDLRNSKAADVVLELRRFGITVDVADSLASSSDAQHEYGISLTPVGDMAKADAVIVAVAHRDYIEGGWDLVTSLLKDGRGIVMDVKGILDRSTKPDGVKLWRL*