ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_131489_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2157..3212

Top 3 Functional Annotations

Value Algorithm Source
Iron-dependent peroxidase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP43_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 357.0
  • Bit_score: 580
  • Evalue 8.00e-163
iron-dependent peroxidase similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 357.0
  • Bit_score: 580
  • Evalue 2.30e-163
Peroxidase {ECO:0000313|EMBL:KEA08335.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 357.0
  • Bit_score: 580
  • Evalue 1.10e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGACTCTGGGTTGCCATCTGTCGTTTCACAGCCGGTCGTCGCGCAGCTCACCCGGGCCGCGATCTTTCTCGTGGTGACGGTCAAGCCCGGACCGGACGCCGAGACGGCGGTGCGGGGGCTCTGCGGTGATCTTTCGGCGCTGCTGCGTGCCGTCGGCTTCCGCGACCTCGAGGGCCGGCTGTCCTGCGTGACGGCGTTCGGCTCCGATGCCTGGGACCGGCTGTTCGGCACGCCGAGGCCGAGGGACCTGCATCCGTTCCGCGAGATCCACGGCCGGCATCACGCCGTCTCGACGCCGGGCGACATCCTCTTCCACATCCGCGCCACGCGCATGGATCTGTGCTTCGAGCTGGCAAAGGAGATCATGGTGCGGGTGGGTGACGCCGTCGCCACGGCGGACGAGGTGCAGGGCTTCAACTATTTCGACGACCGCGACCTCATCGGCTTCGTCGACGGCACGGAGAACCCGGTGGACCAGGATGCCGTCAAGGCGGCGATCATCGGCGAGGAGGATGCGGCCTTTGCCGGCGGGAGCTATGTGATCGTGCAGAAATATCTGCATGATCTGAAGCGATGGAACGAAGTTCCCGTGGAGCAGCAGGAGAAGATCGTCGGCCGGGCCAAGCTGTCCGACATCGAGCTCGACGATGCCGTGAAGCCGAGCTACGCGCACAACGCCTTGACGACGATCATCGAGGATGGCGAGCAGCTGGAGATCGTCCGCGACAACATGCCGTTCGGCGATGTCGGCAAGGGCGAGTTCGGCACCTATTTCATCGGCTATGCCCGCTCGCCGCGCCGGATCGAGCTGATGCTGCAGAACATGTTCGTCGGGCGGCCGCCGGGCAATTATGATCGGCTGCTCGATTTCAGCCGCGCGGTGACGGGCACCCTGTTCTTCGTGCCCACGGCGACGTTCCTGGACAATGTCGCGGCAGGCGCCGCGCCAGTTTCCGACGCCGGGGAGCCCGAGGCGACGGCTCGGGCCCGGTCGCCCCGGAACGATGGTTCACTCGGTATCGGCTCTCTCAAGAACGAGGCGGGACATGAATAA
PROTEIN sequence
Length: 352
MDSGLPSVVSQPVVAQLTRAAIFLVVTVKPGPDAETAVRGLCGDLSALLRAVGFRDLEGRLSCVTAFGSDAWDRLFGTPRPRDLHPFREIHGRHHAVSTPGDILFHIRATRMDLCFELAKEIMVRVGDAVATADEVQGFNYFDDRDLIGFVDGTENPVDQDAVKAAIIGEEDAAFAGGSYVIVQKYLHDLKRWNEVPVEQQEKIVGRAKLSDIELDDAVKPSYAHNALTTIIEDGEQLEIVRDNMPFGDVGKGEFGTYFIGYARSPRRIELMLQNMFVGRPPGNYDRLLDFSRAVTGTLFFVPTATFLDNVAAGAAPVSDAGEPEATARARSPRNDGSLGIGSLKNEAGHE*