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berkeley_reactor_200306_biofilm_scaffold_132711_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1563..2762)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Methyloferula stellata RepID=UPI000362BB91 similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 393.0
  • Bit_score: 659
  • Evalue 1.20e-186
ABC transporter permease {ECO:0000313|EMBL:KFG67279.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 399.0
  • Bit_score: 636
  • Evalue 2.60e-179
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 397.0
  • Bit_score: 632
  • Evalue 5.70e-179

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAACTTCAGACACATCCTGCTCGCGGCGGCGCTCCTCGGGGCGAGCGCCGGCCTGGCGCAGGCCGAGGTGGCGGTGAAGCTCGGCGTGCTCAACGACCGCTCCGGCGTCTATGCCGACCTCTCGGGCGAAGGCTCGGTCATCGCCGCGCAGATGGCGGTGGAGGACTTCAAGGCGGCGGAGAAGGGCATCAAGGTCGAGATCATCTCGGCCGACCACCAGAACAAGCCCGACATCGGCGCCGGCATCGCCCGGCAGTGGTACGACCAGGACGGCGTCGACGCCATCCTCGACGTGCCGACCTCCTCGGTGGCGCTGGCCGTCAGCCAGGTCACCAAGGAGAAGAACAAGGTCTTCATCGATTCCGGCGCCGGCGCCACCGACCTCACCGGCAAGCAGTGCTCGCCCAACACCATCCACTGGACCTACGACACCTATGCCCTCGCCAAGGGCACGGGCGGCGCCATGGTCAAGCGCGGCGGCGACACCTGGTTCTTCATCACCGCCGACTACGCCTTCGGCAAGTCGCTGGAGGACAACACCACCGCCATCGTCACCGCGGCGGGCGGCAAAGTGCTTGGCTCGGTCAAGACGCCCTTCCCGGCCAGCGACTTCTCCTCCTTCCTGCTCCAGGCGCAATCCTCCGGCGCCAAGGTGATCGGCCTCGCCAATGCCGGCGGCGACACCATCAACGCCATCAAGCAGGCCTCCGAGTTCGGCATCACCCAGGCCGGCCAGAGTCTCGCCGGCCTCCTCATCTTCATCAGCGACGTGCACGCCCTGGGCCTTCAGGCGGCGCAGGGCCTGGTGCTGACCGAGGCCTTCTACTGGGACCTCAACGACGGCACCCGCGAATGGTCCAAGCGCTTCGCCGCCCGGAGCGGCGGCAAGATGCCGACCATGGTGCATGCCGGCGTCTATTCCGGCGTGCTGCACTATCTGAAAGCGATCGACGCCCTGAAGAGCAAGGACCCGGCTCAGGTCATCGCCAAGATGAAGGAGATGCCGACCGACGACCCGCTGATGGGCAAGGGCCAGGTGCGCGCCGACGGCCGCGTCATCCACGACATGTACCTGTTCGAGGTGAAGAAGCCGGCGGAATCCAAGGGCGAGTGGGACTATTACAAGCTGCTCGCCACCATCCCCGCGGCCGAGGCCTTCAAGCCGATGGCCGACGGCGGCTGCCCGCTGGTGAAGTGA
PROTEIN sequence
Length: 400
MNFRHILLAAALLGASAGLAQAEVAVKLGVLNDRSGVYADLSGEGSVIAAQMAVEDFKAAEKGIKVEIISADHQNKPDIGAGIARQWYDQDGVDAILDVPTSSVALAVSQVTKEKNKVFIDSGAGATDLTGKQCSPNTIHWTYDTYALAKGTGGAMVKRGGDTWFFITADYAFGKSLEDNTTAIVTAAGGKVLGSVKTPFPASDFSSFLLQAQSSGAKVIGLANAGGDTINAIKQASEFGITQAGQSLAGLLIFISDVHALGLQAAQGLVLTEAFYWDLNDGTREWSKRFAARSGGKMPTMVHAGVYSGVLHYLKAIDALKSKDPAQVIAKMKEMPTDDPLMGKGQVRADGRVIHDMYLFEVKKPAESKGEWDYYKLLATIPAAEAFKPMADGGCPLVK*