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berkeley_reactor_200306_biofilm_scaffold_132711_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 12814..13758

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIL5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 311.0
  • Bit_score: 251
  • Evalue 7.60e-64
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDX51209.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 312.0
  • Bit_score: 462
  • Evalue 3.00e-127
sugar ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 308.0
  • Bit_score: 250
  • Evalue 3.70e-64

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGAGGAAGTTCCTGACGGCCACGATGTCCGCGCTCGCCGTGGCGTGGGCGGTCGCCGGCGACCCGGTCGTCGCCGAGGCCAAGACCCTCGGCATCGTCGCGCTGCTCGCGAACGACGCCCTCAACATCGCTGTGATCGCCGGCGCCACCGATGCCGCCAAGAAAGCCGGCTGGGACGTGAAGGTCACCGACACGCAGGCGAGTGCCGACCAGGCCAATGCCGCGATGCGCAATTTCGCGGTGCAGAAGGTCGATGCGATGTTCGTGCTCGCCTTCGCGAGCTCCTCCATCGGCGCCGGTCTCGCAGCCGCCAACGACGCCGGCATCCCGGTCGCCACATGGGGTGGCGAGATCGTCCCCGGCATCGTGGTCACCACCAGCGGCAGGACGGTCGGCGACGACTCGGCCAAGTATCTCCTGGGCCAGGTCGGCGACAGCGCCGACATCCTCGCCATGACCTTTCACCCTGGAAAGCTCTGCATCGATCGCGGCGAGGCCTTCGACGCGGCGGTGAAAGGCAAGGCCGGCCTCAACATCACCTACAACGAGGTCACCGTTCCCGGCCAGGTGCAGAACGGCAATGCCATGGCACAGGCCTGGCTGACCGCGCATCCGGCCGGCGGCAAGACCAAGCTCGCCATCTGGTCGTGCTGGGACGAGCCGATGCAGGGCGCCGTCGCCGCCATCCGCCAGGCGGGGCGCGACGACGTGACCACCGTCTCCATCAACGGGAGCCCGCAGGGCGTCGATCTGGTCAAGAACGGCGACATGACCGCGACCGTCTGGCAGCCGGCCTACGCCGAGGGCGAGGCGGTGTTCAAGACTATCCTCGAGGCCATGGCGGCCGGGAAGGATTGGAAGCCGAAGGTCATCGAAATTGCCGGCATCGTGGTCAGCAAGGACAACGTCGACAAATTTCTCGCTGACCATCCCAGTGGCCAGTAA
PROTEIN sequence
Length: 315
MRKFLTATMSALAVAWAVAGDPVVAEAKTLGIVALLANDALNIAVIAGATDAAKKAGWDVKVTDTQASADQANAAMRNFAVQKVDAMFVLAFASSSIGAGLAAANDAGIPVATWGGEIVPGIVVTTSGRTVGDDSAKYLLGQVGDSADILAMTFHPGKLCIDRGEAFDAAVKGKAGLNITYNEVTVPGQVQNGNAMAQAWLTAHPAGGKTKLAIWSCWDEPMQGAVAAIRQAGRDDVTTVSINGSPQGVDLVKNGDMTATVWQPAYAEGEAVFKTILEAMAAGKDWKPKVIEIAGIVVSKDNVDKFLADHPSGQ*