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berkeley_reactor_200306_biofilm_scaffold_135355_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1295..1696)

Top 3 Functional Annotations

Value Algorithm Source
Putative translation initiation inhibitor, yjgF family n=1 Tax=Burkholderia sp. BT03 RepID=J2Q9A9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 123.0
  • Bit_score: 152
  • Evalue 1.60e-34
Endoribonuclease L-PSP {ECO:0000313|EMBL:EUC18553.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 123.0
  • Bit_score: 152
  • Evalue 2.20e-34
endoribonuclease L-PSP superfamily similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 128.0
  • Bit_score: 121
  • Evalue 1.10e-25

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Taxonomy

Burkholderia sp. BT03 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGATCCAGCGCCATTTCGTCGCCGCCGCGCCGCCGCCGCCCAAGGGCGTCAAGTACCACCATGCCAGCGCCGCGGCCGGCTGGCTCCACGTCACCGGCCAGCTTCCCACCGATCCCGCCGCGCCGGACGCGCCCTTTCCCGAGGGCATCGAGGCGCAGACCGCGCAGACCTTCCGCAATCTCGCCACCATCGTCGAGGCCGCCGGCTATTCCTTTGCCGACACCGTGTTCGCACGCATCTACCTCAGCGACTTCGACCGCGACTATGACGGCCTGAACCGGGCCTTCTACCGCGTGTTCACCGACGAGGCGGCCGTGCCCTCGCGCACCACGGTGGGCGTCGCCAGGCTCGGGCGCGGCGCCCTGGTCGAGATCGACCTCGTGCTCCATCGCGAGCCCTGA
PROTEIN sequence
Length: 134
MIQRHFVAAAPPPPKGVKYHHASAAAGWLHVTGQLPTDPAAPDAPFPEGIEAQTAQTFRNLATIVEAAGYSFADTVFARIYLSDFDRDYDGLNRAFYRVFTDEAAVPSRTTVGVARLGRGALVEIDLVLHREP*