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berkeley_reactor_200306_biofilm_scaffold_135355_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 7179..8993

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035F45C0 similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 589.0
  • Bit_score: 758
  • Evalue 4.80e-216
ABC transporter {ECO:0000313|EMBL:ETR78369.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 602.0
  • Bit_score: 776
  • Evalue 1.80e-221
lipid A ABC exporter family, fused ATPase and inner membrane subunits similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 578.0
  • Bit_score: 745
  • Evalue 9.10e-213

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1815
ATGGGTCCAACCTCTTCAGCCGCCGAGACGCCGGCGCCCGGCGACGGACGCGCTGAGCGGCGCCGGGCGCTCCGCCCGCTCCTGGCGCTGGCACCCTTCGCGCTGCGCTACAAGGTGCGGATCATCGCCGCCTTCTTCGCGCTCCTGGCCGCCTCGGCCGCGACGCTGGTGGTGCCGGTGGCGCTCCGGCGCATGATCGACTTCGGCTTCTCCGCCGACAAGGCCGACTACATCAACGACTACTTCCTCGCCATGCTCGGCGTCGCGGCCGTCCTCGCCCTGGCGAGCGCCTCGCGCTTCTACCTCGTGATGACGCTGGGCGAGCGCGTGGTGGCAGACGTGCGCACGAGGGTGTTCGAGCACCTCACCTGCCTCTCGCCCGCCTTCTTCGACACGGCCAAGATCGGCGAGGTGGTCTCGCGCCTCACCGCCGATACCACCCAGATCAAGGCGGCCTTCGGCTCCTCCGCCTCGATCCTGCTGCGCAACCTGTTCCTGTTCGTCGGCGCGGTCGTCATGATGGTGGTGACCAGCCCGCGCCTCTCGGCCCTGGTGCTGATCGCGATTCCGGTGATCGTGCTGCCGCTGGTGGCGTTCGGCCGCAACGTGCGGCGGCGCTCGCGCCTGGCGCAGGACATGCTGGCACACGCCTCCGCCTATGCGGCGGAGATGATCGGCGCGATGCGGACCGTGCAGGCCTTCACCGCCGAGCGCCTGGTGACCTCGCGCTTCGACGGCGAGGTGGAGCGCGCCTACGATGCGGCGGCCGTCTCGACCCGGACGCGGGCGATCCTGACCTCGATCGTCATCTTCCTGGTGTTCGGCTCGATCGTCGGCGTGCTGTGGTACGGCGCCCACGACGTGGTCGCGGGGCGCCTCTCCGCCGGCACGCTGAGCCAGTTCGTGCTCTATGCCGTGTTCGGCGCCGGGGCGCTGTCGGAGCTCAGCCAGGTCTGGGCCGACATCAGCCAGGCCGCCGGGGCGGCCGAGCGCCTGGGCGAGCTCCTGGACGAGAAGCCCGCCATCGCCGCCCCGGCAAAGCCCGTGCCGCTGCCGGCGCCGGTGCGCGGCGCCATCCGCTTCGAGGGCGTCTCCTTCGCCTATCCCGCCCAGCCGGACCGGTGGGTGGTGGAGCGCCTGTCGCTCACCGTGAAGCCGGGCGAGACGGTGGCGATCGTCGGCCCCTCCGGCGCTGGCAAGAGCACGCTCCTGCAACTGCTGCTGCGCTATTACGATCCGCAGGACGGCCGCATCCTGCTCGACGGCGTGGCGCTGCCGCAGGCCGATCCCGCGGCGGTCCGCCGGCAGCTGGCCCTGGTGCCGCAGGACCCGGTGGTGTTCGGCGCCAGCGCCCGCGACAATATCCGCTTCGGCCGGCCCGAGGCCAGCGATGCGGAGGTGGAGGAGGCGGCACGGCTCGCCGCCGCCGACGGCTTCATCCGCGCCATGCCCCGGGGCTACGACACCCCGATCGGCGAGCGCGGGGTGACGCTGTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGCGCCATCCTGAAGAACGCGCCGGTGCTGCTGCTCGACGAGGCGACCTCGGCGCTGGATTCGGAGAGCGAGACGGCGGTGCAGCAGGCGCTCGACACGCTGATGCAGGGCCGCACCACGCTGGTGATCGCCCATCGCCTGTCGACCGTGCTCGCCGCCGACCGCATCGTCGTGATGGACGAGGGGCGCATCGTCGAAGAGGGCACGCATGCCGCCCTGGCCGCCAGGGGCGGCCTTTATGCGCGTCTGGCCGAGCTGCAGTTCGGGGTCAAGGACGCCGCCGCCTGA
PROTEIN sequence
Length: 605
MGPTSSAAETPAPGDGRAERRRALRPLLALAPFALRYKVRIIAAFFALLAASAATLVVPVALRRMIDFGFSADKADYINDYFLAMLGVAAVLALASASRFYLVMTLGERVVADVRTRVFEHLTCLSPAFFDTAKIGEVVSRLTADTTQIKAAFGSSASILLRNLFLFVGAVVMMVVTSPRLSALVLIAIPVIVLPLVAFGRNVRRRSRLAQDMLAHASAYAAEMIGAMRTVQAFTAERLVTSRFDGEVERAYDAAAVSTRTRAILTSIVIFLVFGSIVGVLWYGAHDVVAGRLSAGTLSQFVLYAVFGAGALSELSQVWADISQAAGAAERLGELLDEKPAIAAPAKPVPLPAPVRGAIRFEGVSFAYPAQPDRWVVERLSLTVKPGETVAIVGPSGAGKSTLLQLLLRYYDPQDGRILLDGVALPQADPAAVRRQLALVPQDPVVFGASARDNIRFGRPEASDAEVEEAARLAAADGFIRAMPRGYDTPIGERGVTLSGGQRQRIAIARAILKNAPVLLLDEATSALDSESETAVQQALDTLMQGRTTLVIAHRLSTVLAADRIVVMDEGRIVEEGTHAALAARGGLYARLAELQFGVKDAAA*