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berkeley_reactor_200306_biofilm_scaffold_135355_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12421..13491)

Top 3 Functional Annotations

Value Algorithm Source
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 363.0
  • Bit_score: 281
  • Evalue 1.40e-72
tRNA(Ile)-lysidine synthase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJW9_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 363.0
  • Bit_score: 281
  • Evalue 1.00e-72
tRNA(Ile)-lysidine synthetase similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 363.0
  • Bit_score: 281
  • Evalue 2.90e-73

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Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGCGCCGACGGGCGCGGCGGCGCCGGCCGGAGCCGCGATCGCCGACCCCGAGCTCGACGCGCTGCTGCGCGGCTTCGAGGCCCGCCCCGGCCTGGTCCTCGCGGTCTCCGGCGGCGCCGATTCGACCGCCCTCATGCTGCTGGCGGCGCGCTGGCGCGCCCTTGGCGGGGCGACCCCGATCATCGTCGGCACGGTCGACCACGGCCTGCGGGCCGAGGCCGCGGCCGAATGCGAGGCCGTGGCGGCGCAGGCGGCACGGCTGGCGCTGCCCTGCCGGATCCTGCGCTGGGCGGCGGCCAGACCCGCCTCGCGCCTGCAGGAGCGGGCCCGCGCCGCCCGCTACGCCCTGCTCGCCGGCCTGGCGCGCGAGGTCGGGGCCGATGCCCTGGCCACCGCGCACACCCTCGACGACCAGGCCGAGACCGTGCTGATGCGCCTCGCCCGCGGCTCCGGCATCGACGGGCTGGCGGCGATGCGGCCTTCGACCCCGCGGCTCGGCCTGACGCATCTGCGCCCGCTGCTCGCCTGCCCCAGGGCCGGGCTGGTCGCGACTCTGCGCGAGGCGGGCCTGTCCTGGGTCGAGGACCCCTCCAACGCCGATCCTCGTTTCGAGCGCGTGCGCGCCCGCCGCCTGCTCGCCGGCCTCGCCGGGGCGGGGCTGACGGCGCCGCGCCTCGCCGTGCTGGCGGCGCGGGCCGGCCGGGCGGCCGAAGCGCTGGACCGGACGGCGCGGGCACTGTTCGCCGAGATCGTCTCGGCCGACGGGACTGGCCTGCGTATCGCCGCAGCCGGCTTTGCCGCAGCCGCGCCGGAGCTGCGCCTGCGCCTGATCGCCCTCGCGGCCGAGGCGGTGGCGCCGGCGGCGACGGACGAGGCCTATCCCCCCCGCCTGGAGCGGCTGGAGGCGCTGGGAGCGGCGATCGAGGTGGCGCGGGCGGCGGGCCGGCCGCTGCGCCGCAGCTTCGCCGGCGCCGTGCTCGGCCTGGACCGCAGCGGCGCCCTCGCCGTCGCCGCCGAGGGGCCGCGCCGGCGCGGCAGCGCCGTCAACGCCGCCGTAAGACGAACATGA
PROTEIN sequence
Length: 357
MAPTGAAAPAGAAIADPELDALLRGFEARPGLVLAVSGGADSTALMLLAARWRALGGATPIIVGTVDHGLRAEAAAECEAVAAQAARLALPCRILRWAAARPASRLQERARAARYALLAGLAREVGADALATAHTLDDQAETVLMRLARGSGIDGLAAMRPSTPRLGLTHLRPLLACPRAGLVATLREAGLSWVEDPSNADPRFERVRARRLLAGLAGAGLTAPRLAVLAARAGRAAEALDRTARALFAEIVSADGTGLRIAAAGFAAAAPELRLRLIALAAEAVAPAATDEAYPPRLERLEALGAAIEVARAAGRPLRRSFAGAVLGLDRSGALAVAAEGPRRRGSAVNAAVRRT*