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berkeley_reactor_200306_biofilm_scaffold_135355_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19819..21027

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D3D33B similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 390.0
  • Bit_score: 507
  • Evalue 9.80e-141
Lytic transglycosylase {ECO:0000313|EMBL:KAI94991.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 398.0
  • Bit_score: 477
  • Evalue 1.20e-131
lytic murein transglycosylase similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 405.0
  • Bit_score: 475
  • Evalue 1.20e-131

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGGGACGGATCGGAGGGGGACTGGTCGCGGGCGCGCTCCTCGCCTTCGCCACGGCGGCCGGCCCGGCGCAGGCGGCGAGCTGCCAGCCGCAGCCCTTCGCGCCATGGCTGCAGGGCGTGCGGCAGGAGGCGGCGGCCAAGGGCATCTCGCAGGGCACGATCGCCGCGGCGCTCGACGGCATCACCTTCGATCCTGCCGTGGTGTCGCGCGACCGCGGCCAGAGCGTGTTCTCCCAGACCTTCCTGGAGTTCGCCGGCCGCATGGTGGCGCGATACCGGCTGCAGAAGGCGGCGAGCCTGATGAAGGCCAATGCCCGGATCTTCGCCCGCATCGAGCAGCAATACGGCGTGCCGGCGCCGGTCATCGCGGCGTTCTGGGGGCTGGAGACCGATTTCGGCGCGGTCATGGGCAACCTGCCGACGCTGCGCTCGCTGGCGACGCTCGCCTATGACTGCCGCCGGCCGCAGATGTTCCGGGCCGAGCTCCTCGATGCGCTGGAGATCATCGAGCGCGGCGACCTGACCGCGGCCGAGATGGTCGGGCCGTGGGCCGGCGAGCTCGGGCAGTTTCAGTTCCAGCCCTCCTACTACGTCAAATATGCCGTCGACTTCGACGGCGACGGCCGGCGCGACCTGATCCGCTCGACGCCCGACGCCCTGGCCTCCGCCGGCAATTTCCTGGCGAGCCTGGGCTGGCAGCGCGGCCAGCCCTGGCTGCAGGAGGTGCGGGTGCCGGCCGAGATGCGGTGGGAGGAGGCGGACCTCGCCATCGAGCATCCGCGCTCGCAATGGGCGGCCTGGGGCGTCAAGGCGGCGGGCGGCGCGCTGCCCGCCGACGCCATGCCGGCCTCGCTGCTGCTGCCGATGGGGCGCAACGGCCCGGCCTTCCTCGCCTACCCCAATTTCCGCGTCTATCTCAAATGGAACCAGTCGCTGATCTATGCCACCACCGCCGCCTATTTCGCCACGCGGCTGTCCGGCGCCCCGGCGGTGTCGCGCGGCAACGGCCCGGTGGCGCCGATGGACTACCGCGAGATCAAGGCCTTGCAGCAATTGCTCGTCAAGGGCGGCTACGAGGTCGGCGAGGTCGACGGCAAGCTCGGCGCCGTGACGCGGGACGGCGTCAAGAAGGCGCAGCTGAAGTTCGGCCTGCCGGCCGATTCCTATCCGACGCCGGAGCTGGTGGAGCGGTTGCGCAGCGGACGGTGA
PROTEIN sequence
Length: 403
MGRIGGGLVAGALLAFATAAGPAQAASCQPQPFAPWLQGVRQEAAAKGISQGTIAAALDGITFDPAVVSRDRGQSVFSQTFLEFAGRMVARYRLQKAASLMKANARIFARIEQQYGVPAPVIAAFWGLETDFGAVMGNLPTLRSLATLAYDCRRPQMFRAELLDALEIIERGDLTAAEMVGPWAGELGQFQFQPSYYVKYAVDFDGDGRRDLIRSTPDALASAGNFLASLGWQRGQPWLQEVRVPAEMRWEEADLAIEHPRSQWAAWGVKAAGGALPADAMPASLLLPMGRNGPAFLAYPNFRVYLKWNQSLIYATTAAYFATRLSGAPAVSRGNGPVAPMDYREIKALQQLLVKGGYEVGEVDGKLGAVTRDGVKKAQLKFGLPADSYPTPELVERLRSGR*