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berkeley_reactor_200306_biofilm_scaffold_140837_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 269..2458

Top 3 Functional Annotations

Value Algorithm Source
Ferrichrome outer membrane transporter n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBS8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 724.0
  • Bit_score: 914
  • Evalue 3.70e-263
Ferrichrome outer membrane transporter {ECO:0000313|EMBL:CCV13870.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 724.0
  • Bit_score: 914
  • Evalue 5.20e-263
TonB-dependent siderophore receptor similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 718.0
  • Bit_score: 614
  • Evalue 2.20e-173

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2190
ATGATGGCGGTTGCACGGGGCAATGACGTGGATCGAGGCGCGGGCATCGGCAGAAGGCCGTCCCTGCGCGGCGCGCTGCTGGCGATGACCTGCCTGCCGGCGCTGGCGGCGGCCGGCGCCGCCCTGGCGCAGGAGCAGGCCACGACCGTGCTCGAGCCCGTGACCGTGTTCGGCGAGGCGGCCAGCGCCTTCGGCCCCGACAAGGGCTATGTCGCCGAGCGCACCACCACCGGCTCGAAGACCGACACGCCGCTGAAGGAGATCCCGCAATCGGTCTCGGTGATCACCCGCAAGGAGATGGACGACCGCGCCCCGGCCCAGCTCGAGGACATCCTGTCCTACACCGCCGGCGTCACGTCCTCGCCCTGGGGCGTCGACGACCGCTTCGACCAGTTCCTGATCCGCGGCTTCGACATCGGACCCTATGCGGTCTACCGCGACGGGCTGGCCCAGAAGGCGCTGGACTTCTCCGGCTTCAAGATCGAGCCCTACAGCCTCGAGCGCCTGGAAGTGCTGAAGGGCCCGTCCTCGGTGCTCTACGGCGAGAACGAGGTCGGCGGCATGGTCAACGCCGTGACCAAGCGTCCGACCCTGGATCCGCTCGCCAGCGCCTTCATCAGCTACGGCAGCTTCAACACCATCGAAACCGGCTTCGACGTCGGCGGCCCGGTCGACGCCAACGGCGTGCTGAGCTATCGCCTGACCGGCCTCTATCGCGACGGCGCCATGCAGACGGACGGTTCGCAGAACGACCGCATCTTCATCGCCCCGGCCGTGACCTTCCGGCCCGACGACAGGACGACGCTGACTCTCCTCGCCAACTACCAGTCGGACAAGCTGCAGCCGAACACCTTCCTGCCCGTCGGCCTGCCTCGCAGCTTCACCACCGATTCCGACCATTTCAGCCATTACGACGCGCAGCACTGGTCGGTCGGCTACCAGTTCGAGCACCGCTTCAACGACGAATGGACGGTGCGCCAGAACATGCGCTACGCCGTGCAGGAGACGGACTACCAGCACCTCTATTACGGCAGCGCCTACGGAGGCGATTCGCTGGTCTGCTCGGGCAGCAGCCTGGCGAGCTGCACGATGAAGCGCACCACCTTCATGGTGGACGAGCGCGCCTCGATCTTCAGCGTCGACAACCAGGTTCAGTACGACGCGGACTGGGGCCGCATCCAGAACAAGCTCCTGATGGGCCTCGGCTATGACCGCTTCAACGTCAACACCTTGAGCCGCTACGGCGAGGGCCCGGACCTCGACCTCGGCAACCTCGACTACAGCAAGCCCGTGACGGTTCCGGGACCCCTCGTCGACGGCGAGCAGACCATCGACCAGCTCGGCCTCTACGCCCAGACCCAGACCAAGCTCGATGACCACTGGATCCTGACGCTCGGCCTGCGCCAGACCTGGGTGGAGAACCAGAACGTCGATCGGCTCTACAACGACAACACACGACAGAGCGACCACGCGCTCACCAAGCGGATCGGGCTCGGCTACACCTTCGACAACGGCCTGACCCCCTATGCCAGCTACGCCGAATCCTTCACCACCAATGTCGGGCACGACTTCGACGGCGGCGCCTTCAAGCCCTCGCGCGGGCGCCAGTACGAGGTCGGCGTCAAGTATCAGCCGCCGGGCTTCGACGGCTTCTTCACCGCGGCCGTGTTCGACATCACCAAGAGCAACGTGCTCACCACCGACCTCTCTCACCAGGGCTTCCAGGTGCAGACCGGCGAGGTGCGCCATCGCGGCCTGGAATTGGAGGGGCAGTTCAACCTCGCCGAGGGCCTGAGCATGACCGCGGCCTATACCTATCTCGACGCCGAGATCACCAAGGACAACGACGGCAATGTCGGCAAGCGGCCGTCGCTGGTTCCCGAGCACCAGGCTTCGCTCTGGGCGAACTACGAAGTCCAGACCGGCATGCTGCAAGGCGTCAGCGTCGGCGCCGGCGTGCGCTATGTCGGCGCGACCTATGGCGACAACGCCAACAATGTCCCAGTCGCGTCCTACACGCTGGTCGACGCGGCGCTGCGCTATCGCTGGGACAAGTGGCAGGGCGCGGTCAACGTCTCCAACCTGCTCGACAAGACCTACTATTCCACCTGCAACGACAGCCTGGGCAGCCTGAGCTGCATCTACGGCGAGGGGCGGGTGGTGAAGGGCACCCTCTCGGTGAAGTTCTGA
PROTEIN sequence
Length: 730
MMAVARGNDVDRGAGIGRRPSLRGALLAMTCLPALAAAGAALAQEQATTVLEPVTVFGEAASAFGPDKGYVAERTTTGSKTDTPLKEIPQSVSVITRKEMDDRAPAQLEDILSYTAGVTSSPWGVDDRFDQFLIRGFDIGPYAVYRDGLAQKALDFSGFKIEPYSLERLEVLKGPSSVLYGENEVGGMVNAVTKRPTLDPLASAFISYGSFNTIETGFDVGGPVDANGVLSYRLTGLYRDGAMQTDGSQNDRIFIAPAVTFRPDDRTTLTLLANYQSDKLQPNTFLPVGLPRSFTTDSDHFSHYDAQHWSVGYQFEHRFNDEWTVRQNMRYAVQETDYQHLYYGSAYGGDSLVCSGSSLASCTMKRTTFMVDERASIFSVDNQVQYDADWGRIQNKLLMGLGYDRFNVNTLSRYGEGPDLDLGNLDYSKPVTVPGPLVDGEQTIDQLGLYAQTQTKLDDHWILTLGLRQTWVENQNVDRLYNDNTRQSDHALTKRIGLGYTFDNGLTPYASYAESFTTNVGHDFDGGAFKPSRGRQYEVGVKYQPPGFDGFFTAAVFDITKSNVLTTDLSHQGFQVQTGEVRHRGLELEGQFNLAEGLSMTAAYTYLDAEITKDNDGNVGKRPSLVPEHQASLWANYEVQTGMLQGVSVGAGVRYVGATYGDNANNVPVASYTLVDAALRYRWDKWQGAVNVSNLLDKTYYSTCNDSLGSLSCIYGEGRVVKGTLSVKF*