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berkeley_reactor_200306_biofilm_scaffold_140837_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8200..9234)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z7G2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 333.0
  • Bit_score: 339
  • Evalue 3.00e-90
LacI family transcriptional regulator {ECO:0000313|EMBL:CDX14969.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 331.0
  • Bit_score: 396
  • Evalue 2.20e-107
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 344.0
  • Bit_score: 261
  • Evalue 3.00e-67

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGTCCGACACGCGCGCCGATCCCGTCCGCACACCGCGCATCACGGTGAAGGATCTGGCGCGCCAGCTCGGCATGTCGGTCTCGACTGTGTCGCGCGCCTTCTACGACGACGCCGTCATCGCCCCGGAGACCCGCGAGAAGGTGCTGCGCCACGCGGCGGAGATCGGCTACCAGCCCAATCCGCTGGCGCGCGGCCTGATCACCAAGAGCAGCCGCATCGTCGGGCTGGTGGTGTCCGACATCACCAACCCCTTCTATCCCGAGGTGATGACGCGGCTGACCGAGCGGCTGCAGGCGGCGGACTTCAACGTCATGCTGGTCGTGGTGTCGCCGGCCCGCAGCGAGGAGGAGCAGGTGCGCGTGCTGCTCTCCTACCATCCCGACGTGGTGGTGATGCTCGCCACCACCCTGTCCTCGGCCGCCGCGACCGCCTGCCGCAAGGTCGGCACGCCGGTGGTGTTCTTCAACCGCTCGGGCTCGGACGAGCATTCCTATGCCGTGACCTGCGACAACGAGCGGGGCGGACGGCTGATCGCCGATTACCTCATCGACCGGGGGCACCGGCGCATCGGCTTCGTCGCCGGGCGGCCGGATGCCTCCACCAATGTCGACCGCTGGCGCGGCTTCCACGCCCGTTGCCTGGAGCGCGACATTCCCGAGCCGATCGCCAGCGAGGGCACGACCTTCAGCTACGAGGCGGGCTATGCCGCCGCCCGCCGGCTGCTCGCGGGCCCGGACCGGCCGACGGCGCTGTTCTGCGCCAACGACATCCTCGCCATCGGCGCCATGGACGCGGCGCGGCGCGAGGCCGGCCTCGCCGTGCCGGAGGACGTGTCGATCATGGGCTTCGACGATATCGGCATGGCCTCCTGGCCCTCGCATGCCCTCACCACCGTGCGCCAGCCGATTGACCTGATGATCGACCGCACCACGGTGCTGGCCCTGGCGCTGGCCCGCAACGAGCCGTGCGAGCCCGGCGTCCAGCGCCTGCCCGGCCGGCTGGTCGAGCGCAACACCACGAGGTCCTTGCCATGA
PROTEIN sequence
Length: 345
MSDTRADPVRTPRITVKDLARQLGMSVSTVSRAFYDDAVIAPETREKVLRHAAEIGYQPNPLARGLITKSSRIVGLVVSDITNPFYPEVMTRLTERLQAADFNVMLVVVSPARSEEEQVRVLLSYHPDVVVMLATTLSSAAATACRKVGTPVVFFNRSGSDEHSYAVTCDNERGGRLIADYLIDRGHRRIGFVAGRPDASTNVDRWRGFHARCLERDIPEPIASEGTTFSYEAGYAAARRLLAGPDRPTALFCANDILAIGAMDAARREAGLAVPEDVSIMGFDDIGMASWPSHALTTVRQPIDLMIDRTTVLALALARNEPCEPGVQRLPGRLVERNTTRSLP*