ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_140837_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10634..11854)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E791F similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 401.0
  • Bit_score: 605
  • Evalue 3.50e-170
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:CDX42101.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 402.0
  • Bit_score: 654
  • Evalue 5.40e-185
periplasmic binding domain protein similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 405.0
  • Bit_score: 510
  • Evalue 2.50e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGTCCGTATGGAGAAGCACCCTGGCGCGCCTCGGCGCCACGGCCTGCGCCGCGGCGCTCGGCCTGACGCTGGTGGCCGGCACCGCCGGCGCCGAGGACAAGAAGTTCAAGATCTATCTCAGCCTCAGCTACAGCGGCAATTCCTGGCAGTCGGAGGCCGCCAACATCGTCAAGGCGCTGGCCAAGACGCCGCCCTACGACAAGACGGTGGAGCTGACCGAGGTCATCTCCGGCACCGATCCGCAGGCGCAGATCGCCGCCTATGAGAGCATGATCTCGGCCAAGGCCGACGGCATCATCAGCTTCCCGATCTCGTCCACGGCGCTCAACCGGGTGATCAAGCGCGGCTGCGAGAAGGGCGTGAAGTTCTTCATGTACGACGCCACGGTCACCGAGCCGTGCGCCTACAATGTCAGCTACATCACCGCCGGCTTCGGCGAGAACACAGCGCAGGCCCTGGTCAATGCGCTGGGCGGCAAGGGCAAGATCTTCCTCAGCCGCGGCGTGCCCGGCAACTCGGTCGACAAGCGCCACACCGACGGCGCCATGGCGGTGTTCAAGAAATATCCCGGCATCGACGTGGTGGCCGAATATTATTCCTACTGGGACGACCGCACGACCCAGCAGGAGACCGCCAAGGCGCTCGCCGCCCATCCCGACGTCGACGGCATCTGGGCCCAGGCCGGCGAGTACGGCGCGATCCAGGCGTTGATGGACAAGGGCACCAAGCTGGTGCCGATGACCGGCGAGAACTCCAACGGCTTCCGCCTGGCGCTCGCCAACCCCGACTTCCAGAAGCGCGGCCTGAAGGGCGTCTCGGCCGGCTCGCCGCCCGCCACCGCCGGCTATGCCTTCAAGCTGATGATGGAGATCCTCGGCGGCAAGCGCCAGCTCGAGCCGCAGAACATCGAATATCCGCTGCCCTGGGTGCCGGCGGACCAGGTCAAGCTCTGCAAGGGCCAGACCTTCGAGGACGGCTGCAACACCTTCCCGGACGGAGTGGTGCCGAGCTCCTTCGTCACCGAGGTGTTCAACCCGACGCTGCTGCCCGAGCTCTCGCTCCAGTCGGCGCTCGAGGGCAAGCCGACGCCGGGCGCCACCATCCAGCCGCTGCCGGCCGACGTGCCGAAGGCCGCCAACGAGCCCGGCATCAACTGCCAGAAATGCGCCCCGCCGGCCGAGCTCTACAAGCTCACCAAGATCGAGGCGACCGTCAACTGA
PROTEIN sequence
Length: 407
MSVWRSTLARLGATACAAALGLTLVAGTAGAEDKKFKIYLSLSYSGNSWQSEAANIVKALAKTPPYDKTVELTEVISGTDPQAQIAAYESMISAKADGIISFPISSTALNRVIKRGCEKGVKFFMYDATVTEPCAYNVSYITAGFGENTAQALVNALGGKGKIFLSRGVPGNSVDKRHTDGAMAVFKKYPGIDVVAEYYSYWDDRTTQQETAKALAAHPDVDGIWAQAGEYGAIQALMDKGTKLVPMTGENSNGFRLALANPDFQKRGLKGVSAGSPPATAGYAFKLMMEILGGKRQLEPQNIEYPLPWVPADQVKLCKGQTFEDGCNTFPDGVVPSSFVTEVFNPTLLPELSLQSALEGKPTPGATIQPLPADVPKAANEPGINCQKCAPPAELYKLTKIEATVN*