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berkeley_reactor_200306_biofilm_scaffold_140837_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 18786..19703

Top 3 Functional Annotations

Value Algorithm Source
ROK family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH19_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 295.0
  • Bit_score: 172
  • Evalue 3.30e-40
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:EYR78281.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 293.0
  • Bit_score: 199
  • Evalue 3.60e-48
putative glucokinase similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 298.0
  • Bit_score: 181
  • Evalue 2.00e-43

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCCGATTGCGCTCGGCGTCGACGTCGGCGGCACCAAGATCGCGGCGGCCCTCGTCGACCTCGAGGACGGCCGCCTGCTGCACCAGGTCACCGTGCCGACCGCCCTGGTGGACGGCGCCGGCGGCGTGCTGGCAGGCATCCGCCGCGCGGTGACCGCGGTCCGCGACCTCGGCCGCAGCGACGGCGCCGAGCCGATCGGCCTCGGCCTGCCCGAGCTGGTCTCGCCGGAGGGCGCCATCGCCAGCCGCTGGATCGCCGACTGGACGGGGCTCGACCCGCGCCGCGAGCTGGCCGACCTCGGCATCGTCGCCGTCGACAGCGACGTGCGGCTCGCCACCCTGGCCGAGCAGCGCTATGGCCATGGCCGCGACTTCGCCAGCTTCGCCTTCATCACGGCGGGCACCGGCCTCAGCTACAGCCATTGCTCGGACGGGCGGATCCACCGCGGCGCCCACGGCTTCGCCATCCATTTCGCCTCCAACGACCTGATGGTGATGGCCGACGGGCGCCAGGCCGCCTTCAACCTGGAATCCTTCGCCTCGGGCCTGGGCATGGCGCAGGCCTATGCCCGGCGCACCGGCCGCACGGCGAGCGCGCGCGACATCGTCGAGGGCCGCGCCGGGGCGGAGGGAGCGCTGCTGCTCGACCAGGCCACCACCGCCCTCGCCAGCTATGTCGGCCAGATGATCAACATGCTCGACCCGCAGGCCGTCGTCCTCGGCGGCGGGCTCGGCACCGCGCCGGCCTTCTTCGAGGCGGTGCGTGCCAAGGTCCCGGCCTATGTCTGGGCCGAAGCCTGCCGCACCCTGCCGATCCGCGCCAGCGCGCTGCACGCCACCGCCGGCGTGGTCGGCGCCGCCGCGCTGCATGCGCCATCACCTTCGGGACCGAACCAGCCATGGCCTCCGTCAGCCTGA
PROTEIN sequence
Length: 306
MPIALGVDVGGTKIAAALVDLEDGRLLHQVTVPTALVDGAGGVLAGIRRAVTAVRDLGRSDGAEPIGLGLPELVSPEGAIASRWIADWTGLDPRRELADLGIVAVDSDVRLATLAEQRYGHGRDFASFAFITAGTGLSYSHCSDGRIHRGAHGFAIHFASNDLMVMADGRQAAFNLESFASGLGMAQAYARRTGRTASARDIVEGRAGAEGALLLDQATTALASYVGQMINMLDPQAVVLGGGLGTAPAFFEAVRAKVPAYVWAEACRTLPIRASALHATAGVVGAAALHAPSPSGPNQPWPPSA*