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berkeley_reactor_200306_biofilm_scaffold_140837_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27927..29561

Top 3 Functional Annotations

Value Algorithm Source
FAD binding domain protein {ECO:0000313|EMBL:CDX56502.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 531.0
  • Bit_score: 744
  • Evalue 6.90e-212
Possible 3-oxosteroid 1-dehydrogenase id=2429414 bin=GWF1_Rhodobacteraceae_65_7 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 532.0
  • Bit_score: 729
  • Evalue 2.20e-207
Dehydrogenase flavoprotein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 534.0
  • Bit_score: 542
  • Evalue 1.10e-151

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1635
ATGAAGGGACGAGCGGTGAACGGGAACGAAGAGAGCTGCGACGTCCTGGTGATCGGCTCGGGCTCGGCCGCGCTGTCGGCGGCGCTGCGGGCGGCCGCCGGCGGGCTCGATGTCCTGGTGCTGGAGAAGACAGGCTGGCTCGGCGGCACCAGCGCCATGTCCGGCGCCGGTGTGTGGCTGCCGGCCAATCCGATCGCCAAGGCCGCCGGCCTCGACGACAGCCCGGAGGAGGCGCTCGCCTATCTGCGCGCCGTCTCGCCGCCGGGCTGGCAGGTCGAGGAGGACCGGCTGTGGCAGGCCTTCGCAGAGGCCGCCCCGCGCCTCGCCGCCTTCCTGATCGAGCGCACGCCGCTGCGCTTCGAGCTGATCGACGAGCCCGACCCGATGTCCGAGCAGCCCGGCGGCAAGCTGCGCGGGCGCATGCTCTCGCCCAAGGCGCTGAGCCGTCGCCTGCTGGGGCGCCATGCCGGGACGCTCCGCCGCTCGACCCTGCCGCACCTCTTCACCTATCGCGAGATGGTCGACAGCGACCCCTATCACCATCCGGTGCGGGCGGCGCTGCGCGTCCTGCCCAAGCTCGCCTGGCGCCTCCTCACCGATGCCGGCGGCCAGGGCACGGCGCTGATGACCGGCCTGCTCAAAGGCTGCCTCGACGCCGGCTGCCGTATCGAGCTGAAGTCACGCGCCATGGAGCTGCTGCGCGACGAGAGCAACGCCGTCACCGGCGCCGCGGTCGAGCAAGACGGGCGCCGGCGCACCATCCGGGCGCGCCGCGGCGGGGTGCTGGCGACCGGCGGGTTCGAATGGCATGCCGGCCTGCTCGCCGAGCATTTCCCCGGCCCGCTCGACCGGCGCGGCAGCCCGCGCACCAATGCGGGCGACGGCCAGATCATGGCCGCCGCCGCCGGCGCCCGGCTCGACCGCATGGACCAGGCCAACATCTATCCCTGCCTGCCCACCACCTATGAGGGCCAGCCGCACGGCCTGCCCTTCACCTTCCAGGCCGAGCCGCATTCGATCGTGGTCGACCGCCACGGCCGGCGCTTCATCAGCGAGAGCGACTTCAACATCGGCGAGGCCATGGACCGCCGCGATCCCGCCACCGGCGAGCCCGTGCACCTGCCGGTCTGGCTCATCGGCGACCGGCGCCTGCTGCGCCGCTCGCTGCCCTTCCTCTGGTATGCAAGGAAGCAGCCGGGCTGGGTGATCAAGGCGCCCAGCATCGAGGCCCTGGCCGGCCGGACCGGCGTGCCCGCCGGCGCCCTGGCGGAGACCATCGCCCGCTTCAACCGCTTCTGCGACCAGGGCCGCGACGAGGATTTCGCCCGCGGCGAGTCGGCCTGGGAGAGCTACAAGTCGCACGGCCCCGAGGGCAAGTTCGGCCGGCTGGATGAGGCGCCCTTCGTTGCCATGTCGCTCAACCGCTCGATCCTCGGCACCAAGGGCGGGGCGCGCACCAACGAGCGCGGCCAGGTGCTGCGCGAGGACGGCTCGATCATCGCCGGCCTCTATGCCGCGGGCCTGGCCATGGCCAACCCGATCGGCACCCGCGCCGTCGGCGCCGGGACGACCCTGGGGCCGAACCTCACCTGGGGTTTCATCTGCGCCGAGACGCTGCTCCGGGAGAACCGGTAG
PROTEIN sequence
Length: 545
MKGRAVNGNEESCDVLVIGSGSAALSAALRAAAGGLDVLVLEKTGWLGGTSAMSGAGVWLPANPIAKAAGLDDSPEEALAYLRAVSPPGWQVEEDRLWQAFAEAAPRLAAFLIERTPLRFELIDEPDPMSEQPGGKLRGRMLSPKALSRRLLGRHAGTLRRSTLPHLFTYREMVDSDPYHHPVRAALRVLPKLAWRLLTDAGGQGTALMTGLLKGCLDAGCRIELKSRAMELLRDESNAVTGAAVEQDGRRRTIRARRGGVLATGGFEWHAGLLAEHFPGPLDRRGSPRTNAGDGQIMAAAAGARLDRMDQANIYPCLPTTYEGQPHGLPFTFQAEPHSIVVDRHGRRFISESDFNIGEAMDRRDPATGEPVHLPVWLIGDRRLLRRSLPFLWYARKQPGWVIKAPSIEALAGRTGVPAGALAETIARFNRFCDQGRDEDFARGESAWESYKSHGPEGKFGRLDEAPFVAMSLNRSILGTKGGARTNERGQVLREDGSIIAGLYAAGLAMANPIGTRAVGAGTTLGPNLTWGFICAETLLRENR*