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berkeley_reactor_200306_biofilm_scaffold_150155_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 7496..9049

Top 3 Functional Annotations

Value Algorithm Source
xylB; xylulose kinase (EC:2.7.1.17) similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 502.0
  • Bit_score: 594
  • Evalue 2.20e-167
Xylulose kinase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FC86_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 507.0
  • Bit_score: 711
  • Evalue 4.40e-202
Xylulose kinase {ECO:0000313|EMBL:ESX64389.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 507.0
  • Bit_score: 711
  • Evalue 6.20e-202

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGATGCCCGGAGATCTCGTCGTCGGCCTCGATTCCTCCACCTCGGCCACCAAGGCGATCGCCTGGGACCGGCGAGGACGCCTCGTCGCGCAGGGGCGTGCGCCGATCCCGCTCGCCAACCCGCAGCCCGGCTATTTCGAGCAGGACCCGGCCGACTGGTGGTCCTCGTCCGCCGCCGCCCTCAGGGAGCTGACCGGGCAGGTCGATCCCGCCCGCATCGCCGCGGTCGGCATCTCCAACCAGCGCGAGACCTTCGGCGTCTTCAGCCGTGACGGGACGGCGCTGCGCCCGGGCATGGTCTGGCTCGACGACCGCGCCCGGCCGCAGCAGCGCCGCTTCGGCGAGACATTCGGCGCCGAGCGGGTGCATGCCATCTCCGGCAAGCCGCTCGACGTCATTCCCTGCCTCTATCGCTTCATCTGGCTGGCCGAATCCGAGCCGGACCTGTTCGCGCGCGCCGAACGCATCGCCGACGTGCACGGCTACCTCGCCTTCCGCCTCACCGGCGCCTGGGTCACCTCGCTCGCCTCGGCCGACCCGATGGGCGCGGTCGACATGGCCAGCGGCACATGGTCGAGCGAGCTGCTCGCCGCCGCCGGGGTCGACCCCGGCAAGATGCCGGCGCTGGTTGCTCCGGGCGAGCCGATGGGCACGGTCACCACGGCGGCCGCAGCCGTGACCGGGCTCGCCGCCGGCACGCCGGTCATCGCCGGCGGCGGCGACGGCCAGTGCGCCGGCACCGGCGCGGGGCTGATCGCGCCCGGCGCCGCCTATGTCAATCTCGGCACGGCCGTGGTCTCCGGCAGCTTCGGCGCCGCCTACGCCTATCACCGGGCGTTCCGCACCATGAACGCGGTCGCCGACGGCGGCTTCATCTATGAAACCTGCCTGCGCTCCGGCACCTTCCTGGTCGACTGGCTGGCGCGCGAGGTGTTCCTGGTCGAGCCTGGGCGCCAGCGCGATTTCTTCGCCGCGCTGGAGGCGGAGGCGGCGGCGAGCCCGATCGGCGCCGGCGGCGTCGTCCTGGTGCCCTATTGGCAGGGCTGCATGACGCCGCACTGGGACAGCTTCGCCCGCGGCGTCATCGCCGGCCTGTCCGGCTCGACCCGGCGCGGCGATCTCTACCGCGCCCTGCTCGAGGGCATCGCCATGGAGCAGGCGGCGACCACCAACGACGCCGCGGCGGCGACGGGCGTGCCGATCAGTTCCTACATCGCCATCGGCGGCGGCGCCTCCTCCGATCTCTGGGCCCAGATCCTCGCCGACGCCGCGGCCCGGCCGGTGCGGCGCTCGGAAACGGTGGAAGCCTCCTCGCTCGGCGCTGCCATGGCTGCGGCCCGGGGCGCGGGCTGGTTCGCCAGCATCGCCGAGGCCACGGCGGCCATGGCCGGCCGGCCGGTGCGCACCTTCGAGCCGGATCCGCGCCGCTCCGCCCGCTATGCCGAGCTCCTCGCCATCCACGCCGATCTCTGGCCGACGCTTTCGGCCTGGAACGCGCGCCTCGCCGCTTTCACCGAGGCGGGCTCGGCCGACACGGAGGCCGGCCATGGCTGA
PROTEIN sequence
Length: 518
MMPGDLVVGLDSSTSATKAIAWDRRGRLVAQGRAPIPLANPQPGYFEQDPADWWSSSAAALRELTGQVDPARIAAVGISNQRETFGVFSRDGTALRPGMVWLDDRARPQQRRFGETFGAERVHAISGKPLDVIPCLYRFIWLAESEPDLFARAERIADVHGYLAFRLTGAWVTSLASADPMGAVDMASGTWSSELLAAAGVDPGKMPALVAPGEPMGTVTTAAAAVTGLAAGTPVIAGGGDGQCAGTGAGLIAPGAAYVNLGTAVVSGSFGAAYAYHRAFRTMNAVADGGFIYETCLRSGTFLVDWLAREVFLVEPGRQRDFFAALEAEAAASPIGAGGVVLVPYWQGCMTPHWDSFARGVIAGLSGSTRRGDLYRALLEGIAMEQAATTNDAAAATGVPISSYIAIGGGASSDLWAQILADAAARPVRRSETVEASSLGAAMAAARGAGWFASIAEATAAMAGRPVRTFEPDPRRSARYAELLAIHADLWPTLSAWNARLAAFTEAGSADTEAGHG*