ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_150155_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 11657..12709

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 350.0
  • Bit_score: 514
  • Evalue 7.50e-143
UPI0003CE63F7 related cluster n=1 Tax=unknown RepID=UPI0003CE63F7 similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 350.0
  • Bit_score: 514
  • Evalue 5.40e-143
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 348.0
  • Bit_score: 313
  • Evalue 5.10e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGGCTAGGATCGTCATACTCGGCGCAGGCGTCATGGGCTCGGCCATGGCCCTGCCGGCCGCCCATGGCGGCAACGCCGTCGCCCTGGTCGGCACCCATCTCGACGAGGACATCGTCCGCTCCGTCGCCGGCAACGGCCTGCACCCGCGGCTGGGCGTGACGCTGCCGGCCGCGGTCGAGGCGCGGCCCTGGACCGGCTTCGGCGCGGCCATGGCGGAGGGCGCCGACCTCCTCGTCCTCGGCGTCTCCTCGGCCGGCATCGCCTGGGCCATCGACCGCATCGTGGAAAGCGTCAGGACGCCGGTCCCGGTGCTGATGATCACCAAGGGCCTGGCGCCGCGCGACGGCAGCATCGAGGTGCTGCCGCACCTGGTGGCGCGCGAGGTCGAGCGCCGCACCGGCATGGCGCTGCCCGTCATGGCGGTGGGCGGCCCCTGCATCGCCGGCGAGCTGGCGGCGCTGCGCGACACTTCGGTCGTGGTCACCGGCGGCGACGAGGCCCACGTCGCCGGCACGCTCGGGCTGCTGGAGGCGCCGTTCTATCACGCCCGCCCCTCGACCGACGTGATCGGCGTCGAGATCTGCGCCGCCTTCAAGAATTTCTACACCCTGGCGGTCGGGGCCGCCGCCGGCCTGCTGGAGCGGAGCGGCAAGGGCTCGAACGGGGCGCTGATGCACAACCTCGCCGCCTCCCTCTTCACCCAGGCGCTGGAGGAGATGACGGTGCTGGTCGAGGCGCTCGGCGGCCGGGCCGAGACGGTGCGCGGCCTGCCGGGCGCGGGCGACCTCTACGTCACCTGCCAGGCCGGCCGGAACGGGCGCATGGGTCGGCTGCTCGGGCTCGGCCTGCCCTATGCGCGGGCCAAGGCCGAGCACATGGCGTCGGACACGGTGGAGGGGGCGCAGCTCGCGCTCGACCTCGGACCGACCCTGGAGGCGATGATGGCCCGTGGCGCGCTCCCGGGCGAGCGCATGCCGCTGGCGGCGGGGATCGTCGCGGCTGTCTGTCGCGACGAGCCGCTGGCGCTCGCCTTCGATCGGTTCCATCGTTGA
PROTEIN sequence
Length: 351
MARIVILGAGVMGSAMALPAAHGGNAVALVGTHLDEDIVRSVAGNGLHPRLGVTLPAAVEARPWTGFGAAMAEGADLLVLGVSSAGIAWAIDRIVESVRTPVPVLMITKGLAPRDGSIEVLPHLVAREVERRTGMALPVMAVGGPCIAGELAALRDTSVVVTGGDEAHVAGTLGLLEAPFYHARPSTDVIGVEICAAFKNFYTLAVGAAAGLLERSGKGSNGALMHNLAASLFTQALEEMTVLVEALGGRAETVRGLPGAGDLYVTCQAGRNGRMGRLLGLGLPYARAKAEHMASDTVEGAQLALDLGPTLEAMMARGALPGERMPLAAGIVAAVCRDEPLALAFDRFHR*