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berkeley_reactor_200306_biofilm_scaffold_150155_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13738..14265)

Top 3 Functional Annotations

Value Algorithm Source
Putative ring-cleavage extradiol dioxygenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXM2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 159.0
  • Bit_score: 281
  • Evalue 5.00e-73
Putative ring-cleavage extradiol dioxygenase {ECO:0000313|EMBL:EIM28714.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 159.0
  • Bit_score: 281
  • Evalue 7.00e-73
glyoxalase similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 159.0
  • Bit_score: 276
  • Evalue 2.70e-72

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGACCACCGAAACGTCGCCCCGTCTGGCTCCGATCCAGGCCCCGGCGCGCCCGATCGACGCGGGCGTGCGCATCGGGCACATCCACCTCAAGGTGGCCGACCTCGACCGCGCCCTCGGCTTCTATTGCGGCGTGCTCGGCTTCGAGCTGATGCAGCGCTACGGCACGCAGGCGGCCTTCATCTCGGCCGGCGGCTACCACCACCATATCGGCCTCAACACCTGGGAGAGCCGCGGAGGCTCGCCGCCGCCGCCCGGCACCACCGGCCTCTTCCACACCGCGATCCTCTACCCGACCCGGGCGGCGCTGGCCGACGCGTTGAGGCGGCTGATCGAGGCGCGCATTCCCCTCGACGGGGCGAGCGACCACGGCGTCAGCGAAGCGCTCTACCTGCGCGACCCCGACGAGAACGGCGTCGAGCTCTACTGGGACCGGCCGCAGGCAGAGTGGCCGCTGACCGCCAAGGGCGAGCTCGCCATGGTGACGCAGCGCCTCGACCTCGACGCCCTGCTGCGGGCGCAGGCCTGA
PROTEIN sequence
Length: 176
MTTETSPRLAPIQAPARPIDAGVRIGHIHLKVADLDRALGFYCGVLGFELMQRYGTQAAFISAGGYHHHIGLNTWESRGGSPPPPGTTGLFHTAILYPTRAALADALRRLIEARIPLDGASDHGVSEALYLRDPDENGVELYWDRPQAEWPLTAKGELAMVTQRLDLDALLRAQA*