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berkeley_reactor_200306_biofilm_scaffold_150155_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19406..20440

Top 3 Functional Annotations

Value Algorithm Source
CobW n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003757409 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 344.0
  • Bit_score: 506
  • Evalue 1.10e-140
CobW similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 344.0
  • Bit_score: 504
  • Evalue 1.50e-140
CobW {ECO:0000313|EMBL:AHB48209.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 344.0
  • Bit_score: 504
  • Evalue 7.70e-140

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAGCCCGCTCGACAAAGTTCCCTGCACCATCGTCACCGGCTTCCTCGGAGCCGGCAAGACCACGCTGATCCGCCATCTCCTGGAGACGGCGAACGGCCGCCGCCTCGCCCTGATCGTCAACGAGTTCGGCGACGTCGGCGTCGACGGCGACATCCTCAAGGGCTGCGGCATCGAGAGCTGCCCGGCCGATGCCATCGTCGAGCTCGCCAATGGCTGCATCTGCTGCACCGTGGCCGATGATTTCGTGCCGGCGCTGGAGGCGCTGCTCGGCCGGGCCGAGCCGCCCGAGCACATCGTCATCGAGACCTCGGGCCTCGCCCTGCCCAAGCCGCTGGTCAAGGCCTTCGGCTGGCCGGCGGTGCGCTCGCGCGTCACCGTCGACGGCGTGGTCGCGGTCGTGGACGTCGCCGCCGTGGCGGCCGGGCGCTTCGCCGACGATCCGGAGGCGCTGAAGCGCCAGGCCGAGGGCGATGCGGCGCTCGACCACGACAACCCGCTGGAAGAGGTCTACGAGGACCAGCTCCTCTGCGCCGACCTGGTCGTCCTGAACAAGAGCGACCTGATGACGCCCGAGGAGGCGGCCGGTGTCGCCGCCGACATCGTCCGCACCGTGCCGCGCGCCGTGAAGGTGGTGCGCACCAGCCAGGGCCGCATCGACGCGGCCGTGCTGCTCGGCCTCAGCGCTGCGGCCGAGGACGATCTCGCCGCGCGGCCGTCGCATCACGACGCCGAGGCCGAGCACGACCATGACGACTTCGACACCTTCGTCGTCGAGCTGCCGGCCGTCGCCGAGCCCGAGACGCTGCTCGCCCGCCTCAAGGCCACGGCCGAGGCGCACGACATCCTGCGCATGAAGGGCTTCGTCGCCGTCGACGGCAAGCCGATGCGCCTGCTGGTCCAGGGTGTCGGGGCGCGCTTCTCCCACCATTTCGACCGCGCCTGGGCCCCCGGCGAGGCGCGGGCCAGCCGCCTGGTGGTCATCGGCGAGAAGGGCCTCGACCGCGCCGCGATCGAGCAGGCGCTGGCGGCGTAG
PROTEIN sequence
Length: 345
MSPLDKVPCTIVTGFLGAGKTTLIRHLLETANGRRLALIVNEFGDVGVDGDILKGCGIESCPADAIVELANGCICCTVADDFVPALEALLGRAEPPEHIVIETSGLALPKPLVKAFGWPAVRSRVTVDGVVAVVDVAAVAAGRFADDPEALKRQAEGDAALDHDNPLEEVYEDQLLCADLVVLNKSDLMTPEEAAGVAADIVRTVPRAVKVVRTSQGRIDAAVLLGLSAAAEDDLAARPSHHDAEAEHDHDDFDTFVVELPAVAEPETLLARLKATAEAHDILRMKGFVAVDGKPMRLLVQGVGARFSHHFDRAWAPGEARASRLVVIGEKGLDRAAIEQALAA*