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berkeley_reactor_200306_biofilm_scaffold_150415_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13120..13392

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ICE5_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 83.0
  • Bit_score: 65
  • Evalue 2.20e-08
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 83.0
  • Bit_score: 65
  • Evalue 6.30e-09
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACB96742.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 83.0
  • Bit_score: 65
  • Evalue 3.10e-08

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Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGCTGACAGGCGAGCAGGTCCGCGCCGCGCGCGCATTGCTGGGCTGGTCCGAGGACCGTCTGGCCGAGGCGGCCAGCCTCAGCCCGGACACCGTCCGGCTGTTCGAGAATGGTCAGCCGGCTCACTACCAGGCGACGTCCGACCGGCTGCGACGGGCGCTGGAGGCTGCCGGAGCGGAATTCTTCCCGGACAATGGCAGCGTTTCCGTCCAGTTCGGCAGCAAGGCCCGGGAGGGCGCGGCGCCGGACGGGTCCAACGCCGAGGACGACTGA
PROTEIN sequence
Length: 91
MLTGEQVRAARALLGWSEDRLAEAASLSPDTVRLFENGQPAHYQATSDRLRRALEAAGAEFFPDNGSVSVQFGSKAREGAAPDGSNAEDD*