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berkeley_reactor_200306_biofilm_scaffold_154203_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6786..7118

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2TCW5_RHORU similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 109.0
  • Bit_score: 173
  • Evalue 9.20e-41
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 109.0
  • Bit_score: 173
  • Evalue 2.60e-41
Putative transcriptional regulator {ECO:0000313|EMBL:ABC21696.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 109.0
  • Bit_score: 173
  • Evalue 1.30e-40

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Taxonomy

Rhodospirillum rubrum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGGCCGGTAGGCATTCATTCGCGGAGCTTCGGGCTCGCATGTCGCCTGAGGCCAGCGCAGCAGTCGAGGCCGAGGCTGCGCGTCTCGGCGATGAGATGGATCTGGCGGAGGTGCGCCGCGCCCTCAGGCTCTCGCAGGACGAGATCGGCCAGACGCTTCAGATCGGACAAGGCTCCGTCGCCAAGATCGAGAAGCGGGCAGACATGTATGTCAGCACGCTCCGCCGCTTCATCGAAGCCATGGGCGGCGAACTCGAAATCGTCGCGCGCTTCGCCGATCACACGGTCAGGATCAGGAATTTTTCCGATCTTTCTGAGAAATCGCGCATCTGA
PROTEIN sequence
Length: 111
MAGRHSFAELRARMSPEASAAVEAEAARLGDEMDLAEVRRALRLSQDEIGQTLQIGQGSVAKIEKRADMYVSTLRRFIEAMGGELEIVARFADHTVRIRNFSDLSEKSRI*