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berkeley_reactor_200306_biofilm_scaffold_154241_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 318..1847

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037C537B similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 466.0
  • Bit_score: 366
  • Evalue 3.40e-98
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EIF33436.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 438.0
  • Bit_score: 344
  • Evalue 1.50e-91
cyclic nucleotide-binding domain protein similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 480.0
  • Bit_score: 342
  • Evalue 1.10e-91

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Taxonomy

Burkholderia sp. Ch1-1 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1530
ATGACAAGCCAGATCGCCGCCGGGCTCCTGATCTGCCTCTGCGCGACCGCCTGGCGGATGATGCGCTCGCTCCCCGCCTGGCTCCGCCTGGCGACGGGGGCGGTGCTGCTCGCCGGCCTCACCGCGGCGGTGGTCCAGATGGTCGGCTCGCCGCTCCAGCCGGTCTTCGTCGCCACAGGTGCGGCAGCCGTCGTCTGGGAGCAGGTCGTCGTCGCCGCCTGGTGGCTGCTCGCCGCGCGGCTGCTGGTCGAGGTCCTGCGCAGCACGCTCTTCAACCGCGGCCTCGCCGCCAAGGGCCGGCTCCAGGGGGACCTGCTGGCCGGGCTGATCTACCTTGCGGCGGTCCTCACCGTGGTCGACACCGTACTCGACCTGCCGATCCGCGCCCTGCTCGCCACCTCGGGCGTCATCGCCATCGTCCTCGGCCTCGCCCTGCAGAGCACCCTGGCGGACGTGTTCTCCGGCATCGCGGTCGGCATCGAGCGCCCCTTCAACATCGGCGACCGGGTCTGGCTGGAAGGGCCGATCGAGGGCGTCGTCGACCAGGTCAACTGGCGCTCCGTCCGCATCCGCACCGATGGCGGCGACATCGCCACCGTGCCGCACAGCGTGGCGGCCAAGTCCCGGGTGATCAATCGCAGCGTGCCGACGCCGCAGCGCAGCGACTCCGTCCGCATCCCCTGCGCCGCCAGCGTCCCGCCCGAGCGGGTCGCCGAGCTGGTCCGGCACGCATTGCTGCTCAGCCCCAGGATCCTGGCCCAGCCCCAGCCCGCCGTCGCGCTGGTGCGCATCGGCCGGCGCAGCAACGAGTACGAGATCGGCTTCGCCGTGGCGAGCAGCAACGATCTCTGGCACGCCAAGAGCACCCTCCTGGAGCAGGTGCTCCGGCAGTTCCGGTCGGCAGGCGTCGAAACCGCCGACCGACCCGGGGGCGGCGCCACGAGCGAGCCGGATCCGGCGTCCGGCAGCCGCCGCTTCCTCGCCATCCCGCTGTTCCACGACATCGCCGACGATCAGCGCGAGCGGCTGTGCCGGCAGGCGCTGAGCCGGTCGCTGGAGCCGGGCGACGCTCTGTTCCGGCAAGGCGACACGGAGGGGTCGCTGTTCTTCGTCGCCTCGGGCGTGATGGAGGTGACCCGCACCGTCGGAGCCCGGTCCTCGAGCCTGGGCCGCATCGGCGCGGGCGACTATATCGGCGAGATCGGCCTGCTGACGGGGGCTCCGCACGCGGCCACCATCACGGCCCTGACGCCGAGCGACGTCCTCGAGCTCAGGAAGGAGCACCTGGCGCCGCTCCTGGCCGAGACGCCGCACCTGATGCACGCCTTCGAGGCGTCGGCCCGCCGCGGCCAGGCCCTGTTCGATCGCCGGGTCGCCGCCAGCGTCGGCGCCGAGACCGTGCCGCCCGGGCAGCTCCTGGCCCGGATCCGGGATTATTTCCGGGTGCATCATGTCCGGCCCGGGCCGGATGCGCACGCTGCGCGCCGCCACCCCGCGGCCCAGGCGAATTCGCCGCCCGGCGGCGATTGA
PROTEIN sequence
Length: 510
MTSQIAAGLLICLCATAWRMMRSLPAWLRLATGAVLLAGLTAAVVQMVGSPLQPVFVATGAAAVVWEQVVVAAWWLLAARLLVEVLRSTLFNRGLAAKGRLQGDLLAGLIYLAAVLTVVDTVLDLPIRALLATSGVIAIVLGLALQSTLADVFSGIAVGIERPFNIGDRVWLEGPIEGVVDQVNWRSVRIRTDGGDIATVPHSVAAKSRVINRSVPTPQRSDSVRIPCAASVPPERVAELVRHALLLSPRILAQPQPAVALVRIGRRSNEYEIGFAVASSNDLWHAKSTLLEQVLRQFRSAGVETADRPGGGATSEPDPASGSRRFLAIPLFHDIADDQRERLCRQALSRSLEPGDALFRQGDTEGSLFFVASGVMEVTRTVGARSSSLGRIGAGDYIGEIGLLTGAPHAATITALTPSDVLELRKEHLAPLLAETPHLMHAFEASARRGQALFDRRVAASVGAETVPPGQLLARIRDYFRVHHVRPGPDAHAARRHPAAQANSPPGGD*