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berkeley_reactor_200306_biofilm_scaffold_154241_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3458..4480

Top 3 Functional Annotations

Value Algorithm Source
rbsR3; LacI family transcriptional regulator (EC:5.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 330.0
  • Bit_score: 296
  • Evalue 8.20e-78
DNA-binding transcriptional repressor of ribose metabolism n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI27_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 340.0
  • Bit_score: 407
  • Evalue 6.90e-111
DNA-binding transcriptional repressor of ribose metabolism {ECO:0000313|EMBL:CCV16005.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 340.0
  • Bit_score: 407
  • Evalue 9.60e-111

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGGCAACCATACGCGACGTCGCCGAGAAGGCTGGTGTGTCCGTCGCGACCGTCTCGCATGTGGTGAATGGGTCTCGCCGCGTCTCGCCGGAGGTGAAGGCGCGGGTGCTCAAGGCGATCGCCGCGCTGAAATATCGCCGCGACGGCATCGCGCGCAGCCTGCGCATGAGCCAGACCCGCACCATCGGGCTGATGATCTCCGACATCTCCAACCCGTTCTTCGCCGATTTCGTGCGGGGCATCGAGGATGCCGTGCATGCGCGCGATCCCAACTACAACCTGATCCTGTGCAACTCGGAGGAGCAGGAGGACAAGGAGCGGCGCCTGTTCGACGTGGTGCTGGAGAAGCGCGTCGACGGCATCGTCATCGTGCCGGCGGGCGGCAATCGCGACTATCTCAACGACCTGATCGGCACCGGCCTGCCCGTGGTCTTCGCCGATCGCTTCCTGCCGGGGCTGGATGCCGACGCGGTGATCGTCGACAACCGCGACGCCTCCTTCCGGCTGGTCACGCACCTCGTCCGCCTCGGGCACCGGCGCATCGCGGCGCTGAACGCCCATCTCGCCGCCACCTCGATCCGCGAGCGCATCGAGGGCTACCGCGACGCGCTGGAGGCGGCGGGCATCCCCTTCGACGAGAGGCTCGTCGTCACCAGCCGCTCGCGCATCGAGGATGCCGTGGTCGCCGGCAGCGAGGTCCTCGACCTCAGGCCGGCTCCGACGGCCGCGTTCTGCACCAACAACTTCATGACGCTCGGCCTGATCCGGGCGCTGTCCGACCGGGGGCTGCGCTGCCCGGAGGACATGGCCGTCATCGGCTTCGACGACTTCCCCTGGGCTTCGACCTTCCGGCCCCGGCTCACCGTGGTCTCGCAGCCGAGCTACGCCCTCGGCCAGGAGGCGGCCAACCTGCTGTTCGACCGCCTGCTCAAGAAGCGCACCGGCCCGCCGGTGCGGCTGACGCTGGGAACCAGCCTGATCATCCGCGAATCCTGCGGCGCGCACGCCCGCGTCCCGGCCTGA
PROTEIN sequence
Length: 341
MATIRDVAEKAGVSVATVSHVVNGSRRVSPEVKARVLKAIAALKYRRDGIARSLRMSQTRTIGLMISDISNPFFADFVRGIEDAVHARDPNYNLILCNSEEQEDKERRLFDVVLEKRVDGIVIVPAGGNRDYLNDLIGTGLPVVFADRFLPGLDADAVIVDNRDASFRLVTHLVRLGHRRIAALNAHLAATSIRERIEGYRDALEAAGIPFDERLVVTSRSRIEDAVVAGSEVLDLRPAPTAAFCTNNFMTLGLIRALSDRGLRCPEDMAVIGFDDFPWASTFRPRLTVVSQPSYALGQEAANLLFDRLLKKRTGPPVRLTLGTSLIIRESCGAHARVPA*