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berkeley_reactor_200306_biofilm_scaffold_154241_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8724..9794)

Top 3 Functional Annotations

Value Algorithm Source
Fused L-arabinose transporter subunits of ABC superfamily: membrane components n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI41_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 345.0
  • Bit_score: 520
  • Evalue 7.60e-145
Fused L-arabinose transporter subunits of ABC superfamily: membrane components {ECO:0000313|EMBL:CCV16001.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 345.0
  • Bit_score: 520
  • Evalue 1.10e-144
rbsC3; ribose transport system permease RbsC similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 335.0
  • Bit_score: 323
  • Evalue 6.60e-86

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGCGATGGATCAACACTCCCTCGGCGCGTCCTTCGCGAACCGCGCGCGGCCGGCGTCGCGGTTCGGCGCCAACATCTCCTTCCTCGACCTGGTGCAGGGCATCGGCCTGCTCGCCGTCATCCTGCTCGGCTGCCTGGTGATGACCGTGGCGAGCCCGGTGTTCGCCACGACGCGCAACCTGGAGAACGTGCTGCAGTCGGCCACCATCATCGCCGTCGTCGCCATCGGGCAGACCTTCGTCATCCTCGTTGCCGGGATCGACCTCTCGGTCGCCTCGGTGCTGGTGCTCTCCTCGGTGCTGAGCGTCGGCCTGGTCGAGTTCAACGGCTGGTCGCCCGGCCTGGCGATCCTCGCCGCGCTCGGCACGGGCGCGCTGTTCGGGCTGGCCAACGGCCTGGCGGTGACCAAGCTGCGCATTCCGGCCCTGATCGCGACGCTCGCCACCATGAGCATCGGCCGCGGCCTCGCCTATATCTTCTCCGGCGGGCAGAACATCGCCCCGGTGCCCGATATCTTCGTCGACCTGCAGGACGCGCGCATCCTCGGCGTGCCGGCCGTGATCGTGCTGACCCTGGCGCTCGCCGCCATCGCCCAGTTCGTGCTGTCGCGCACCCGCTTCGGGCGATCCGTCTACGCCACGGGCGGCAATGCGCTGGCCGCCCGGCTCGCCGGCATCCGCACCGACCGCGTGATCATCGCCACCTATGTCATCTCCGGGCTGATGGCCGGGATCGCCGGCCTGCTGATCACCGCCCGCTTCGAGGCCGGCGCGGCCACGGCCGCCCAGGGCATGGAGCTCGCCGTGATCGCCGCGGTGGTGATCGGCGGCGTCAGCCTGTTCGGCGGCGAAGGCAACATGGGCGGCATGCTGCTCGGCGTGCTGCTGCTCGGCCTGGTGCAGAACGCGGTCAACCTGCTCGACGTGCCGCCGAACTACGATTCCGTGGTGAGCGGCCTGGTCATCGCCGCGGCCGCCGCCCTCGACGTCTATCGCCGCAGCTATCTCGAGGCCGGCCTGCGCCGGCGGGTCATCGCCGCCAAGGAGGCGAAAGCCGAGAAGCCGAAATAG
PROTEIN sequence
Length: 357
MAMDQHSLGASFANRARPASRFGANISFLDLVQGIGLLAVILLGCLVMTVASPVFATTRNLENVLQSATIIAVVAIGQTFVILVAGIDLSVASVLVLSSVLSVGLVEFNGWSPGLAILAALGTGALFGLANGLAVTKLRIPALIATLATMSIGRGLAYIFSGGQNIAPVPDIFVDLQDARILGVPAVIVLTLALAAIAQFVLSRTRFGRSVYATGGNALAARLAGIRTDRVIIATYVISGLMAGIAGLLITARFEAGAATAAQGMELAVIAAVVIGGVSLFGGEGNMGGMLLGVLLLGLVQNAVNLLDVPPNYDSVVSGLVIAAAAALDVYRRSYLEAGLRRRVIAAKEAKAEKPK*