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berkeley_reactor_200306_biofilm_scaffold_154241_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(19261..20310)

Top 3 Functional Annotations

Value Algorithm Source
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 350.0
  • Bit_score: 375
  • Evalue 5.40e-101
Beta-eliminating lyase superfamily n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWI4_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 350.0
  • Bit_score: 375
  • Evalue 3.90e-101
beta-eliminating lyase superfamily protein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 350.0
  • Bit_score: 375
  • Evalue 1.10e-101

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAACTTTGCCAGCGACAACTGGGCCGGCGCGAGCCCGCGCGTGCTCGACGCCCTGCGGCGGGCGGCCGAGGGCATCGCCCCGGCCTACGGCCAGGACGAGACGACGCAGGCGCTGGCGCGGCGCCTGTCGACCCTGTTCGAGCGCGAGGTCGCGGTCTTTCTGACGCCGACCGGCACGGCGACCAACGCGCTCGCCCTGGCGGCGCTGTGCCCGCCGAACGGCGCGGTGCTGGCGCACGAGGAAGCGCATGTCATCGCCGACGAATACGGCGCCCCGGAATTCTTCGGCCAGGGGACGCGGCTGATCGGCATGCCGGGCGTCGGCGGCAAGATCGACATTGCGGCGATCGAGGCCGCCTTCGACCGCCTGCCGGCCGCCGGCTCGCGCCAGCCCACGCCGGCAGCGCTGACGCTGACCCAGGCGAGCGAATGCGGCGGGGTCTACAGCGTGCCGGAGGTGCAGGCGCTCGCCGCGGCGGCCAAGGCGCGCGGCCTCGCCGTCCACATGGACGGGGCGCGCTTCGCCAACGCCGTGGCGGCCCTGAAATGCACGCCGGCCGAGATCACCTGGAAGGCCGGGGTCGACGCGCTCTCCTTCGGCGGCACCAAGAACGGCGCGCTGATGGCCGAGGCCGTGGTGTTCTTCGATCCGGCGCTGGCGCGCGACTTCGACTGGCGCCGGCGGCGCGGCGGCCACGTCGTCTCCAAGGCGCGGCTGATCTCCGCGCAGTTCCTGGCGCTGCTGGAGGACGGGCATTGGCTCGACCTCGCCCGCCATGCCAACGCCATGGCGGCTCGGCTGGCCGAGGGCCTGCGCACCGCCGGCCATCGCATTCCCTGGCCGACGCAGGCCAACGAGGTGTTCCCGGTGCTGCCGAGGCCGCTGATCGCCCGGCTGCAGGCGGCCGGCGCCGCCTTCTATGAATGGCCGACCCAGAGCCTCGCTCCCGAGGACGCGCCTGAAGAGGACGAGGCGCTGGTGCGCCTCGTCACCTCCTTCGCCACCACGCCGGCGGAGGTCGAGCGCTTCCTCGACGCGGCGGCATAG
PROTEIN sequence
Length: 350
MNFASDNWAGASPRVLDALRRAAEGIAPAYGQDETTQALARRLSTLFEREVAVFLTPTGTATNALALAALCPPNGAVLAHEEAHVIADEYGAPEFFGQGTRLIGMPGVGGKIDIAAIEAAFDRLPAAGSRQPTPAALTLTQASECGGVYSVPEVQALAAAAKARGLAVHMDGARFANAVAALKCTPAEITWKAGVDALSFGGTKNGALMAEAVVFFDPALARDFDWRRRRGGHVVSKARLISAQFLALLEDGHWLDLARHANAMAARLAEGLRTAGHRIPWPTQANEVFPVLPRPLIARLQAAGAAFYEWPTQSLAPEDAPEEDEALVRLVTSFATTPAEVERFLDAAA*