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berkeley_reactor_200306_biofilm_scaffold_154490_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3..788

Top 3 Functional Annotations

Value Algorithm Source
Sel1 repeat protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW29_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 239.0
  • Bit_score: 115
  • Evalue 5.40e-23
Uncharacterized protein {ECO:0000313|EMBL:EWY35838.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 210.0
  • Bit_score: 122
  • Evalue 4.80e-25
sodium-type flagellar motor component similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 225.0
  • Bit_score: 110
  • Evalue 3.80e-22

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
TGCGAGCGGCTCGCCGCGCCCGCGCCGCCCTTCGCCAGCCCGGCTCAGCTCAACGCGGCCCGGTCGCAGAATGTCGACATGCCTCACGCGCTCTCCGCCTGTGAGGCTGCCGTGAGCGCCGATCCGAAGAATCCGCGCCTGCAATTCCTGCTCGGCCGCGTCAATGATCTGTCGAAGACTTATCTGGAGGCGGCGCGTCACTACACCATCGCCGCCGACGCCGGCTATGCCGACGCGCAGGATGCGCTGGGCGTTCTGGTCGTGCTGGGCAGGGGCGTCGTCAAGAACTACACGCGCGCCTTCGATCTCTTCCACAAGGCCGCGCTCGGCGGCTCGCCTTCCGGCATGGGCAATCTCGGCTCGATGTACTCCAGCGGCTTCTCCGTCAAGGAAGACGACGCGATGGCGCTCGCCTGGTACGAGAAGTCGATCGAGGCCGGCAATTCCTTCGGCCTCGCCCAGGCCGGCGTGATGTATTTCAACGGCAAGGGAACGCCGCGCGACTACGACGCCGCCGCGCAATATTTCCAGCAGGAAGCCGACCTCGGCGACGGCTATTCCCTGAAATTCCTCGCCATCATGTATGAGCGTGGCCTGCTCGGAAAACCCGACCCGGCCAAGGCGGCCGAGCTGCGCCTCCAGGCGGCGCAGGTCGATCCCGAGAGCCAGGATCCCAATGTGCCGCTTCCCAGGAAGGTGGTCCGGCAGACCCCTCGCCCCGCGGGCGGCCAGGTCGTGCGCATCCGGCGCTACCATTTCGTCGGCTGCAGCTGGCTCTGGTGCTGA
PROTEIN sequence
Length: 262
CERLAAPAPPFASPAQLNAARSQNVDMPHALSACEAAVSADPKNPRLQFLLGRVNDLSKTYLEAARHYTIAADAGYADAQDALGVLVVLGRGVVKNYTRAFDLFHKAALGGSPSGMGNLGSMYSSGFSVKEDDAMALAWYEKSIEAGNSFGLAQAGVMYFNGKGTPRDYDAAAQYFQQEADLGDGYSLKFLAIMYERGLLGKPDPAKAAELRLQAAQVDPESQDPNVPLPRKVVRQTPRPAGGQVVRIRRYHFVGCSWLWC*