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berkeley_reactor_200306_biofilm_scaffold_154490_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4750..5019)

Top 3 Functional Annotations

Value Algorithm Source
Homospermidine synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9J9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 57.0
  • Bit_score: 55
  • Evalue 1.70e-05
Homospermidine synthase {ECO:0000313|EMBL:ERF86517.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 57.0
  • Bit_score: 55
  • Evalue 2.40e-05

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGAACCCGGCCGTCAGCAGCTTCGCCCTCGGCGATCCCGCCGAGCTGGAGATCGAGGTCGACCGCGTCATCGCCGATTGCGACGGTGACCCGCGCGCCGCGGTGCGCGCCCTGATCGTCGCCAACGCCGTGCTGGAGATCGATCTCGAACGCCAGCGCCGGGAAATCCGCGAGATCGCCATGGCGGTATCGCGAGGCTATGCCCGCGAGCTCTTCTACAAGCGGCTGCAGTGCTCGGAGGACCCGATTCCTTACAAACCGGGCTCCTGA
PROTEIN sequence
Length: 90
MNPAVSSFALGDPAELEIEVDRVIADCDGDPRAAVRALIVANAVLEIDLERQRREIREIAMAVSRGYARELFYKRLQCSEDPIPYKPGS*