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berkeley_reactor_200306_biofilm_scaffold_154490_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9632..10645)

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI00036F8A2E similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 337.0
  • Bit_score: 497
  • Evalue 8.50e-138
binding-protein-dependent transporters inner membrane component similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 336.0
  • Bit_score: 487
  • Evalue 1.90e-135
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADH88126.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 336.0
  • Bit_score: 487
  • Evalue 9.50e-135

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGCTCAAATATTTCGCCAAACGGGTGCTGCTGACGCTCCCGATCTTCCTGGCGCTGATCGCCCTGACCTTCTTCGCCATCCGCCTCGTTCCCGGCGACCCGATCGAGGTCCGGCGCGGCGAGCGCGGCATCTCGCCGGAGCGGCTGGCCGAGCTGCGCCACGAGATGGGACTCGACCAGCCGCTGTTGAAGCAATTCTGGGACTATCTCTGGCAGGTCCTGCACGGCGACTTCGGCGTCTCGCTGGTGACCCACGAACCCGTGCTCCGCGAATTCATGACGCTGTTCCCGGCAACGATCGAGCTCGCTGTCTGCGCCATGATCTTCGCGGTCGTGCTCGGCATCCCTGCCGGCATCATCGCCGGCCTGAAGCGCGGATCCTCGGCCGACTACGTGGTCACCGCCGCCGCGGTGACCGGCAACTCCATGCCGATCTTCTGGTGGGGTCTGGTGCTGATCCTGGTGGTCTCGAACCAACTCGACCTCACGCCCGTGGGGGGGCGGGTCAATCTGGAACTCTTCGATATCGAGCCAGTGACCGGCTTCATGCTGATCGACAGTTACCTCTCCGGCCAGGACGGCGCGTTCCAGTCGGCGCTGGCGCATCTGATCCTGCCGGCTATCGTGCTCGGCACCCTGCCGCTGGCGGTGATCACCCGCATCACGCGCTCGGCCATGCTGGAGGTGCTGAACGAAGATTATGTGCGCACCGCACGCGCCAAAGGGCTGTCACCGATCCGCGTCGTCGGCCTGCACGCCCTGCGCAATGCGCTGATCCCGGTCGTCACCGTCATCGGCCTGCAGGTGAGCGCGCTGATCGCCGGAGCTGTGCAGACCGAGACGGTGTTCTCCTGGCCGGGGGTCGGCAAATGGCTGATCGATTCGCTATCGCGACGTGATTATCCCGTGCTGCAGGGCGGGGTTCTGCTCATATCGGTCGTGGTGGTGTTCGTGAACCTGACGATCGATCTGCTCTACGGGCTCATCAATCCGAGGATTCGCCATGGTCGCTGA
PROTEIN sequence
Length: 338
MLKYFAKRVLLTLPIFLALIALTFFAIRLVPGDPIEVRRGERGISPERLAELRHEMGLDQPLLKQFWDYLWQVLHGDFGVSLVTHEPVLREFMTLFPATIELAVCAMIFAVVLGIPAGIIAGLKRGSSADYVVTAAAVTGNSMPIFWWGLVLILVVSNQLDLTPVGGRVNLELFDIEPVTGFMLIDSYLSGQDGAFQSALAHLILPAIVLGTLPLAVITRITRSAMLEVLNEDYVRTARAKGLSPIRVVGLHALRNALIPVVTVIGLQVSALIAGAVQTETVFSWPGVGKWLIDSLSRRDYPVLQGGVLLISVVVVFVNLTIDLLYGLINPRIRHGR*