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berkeley_reactor_200306_biofilm_scaffold_154490_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(16889..17761)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDDA18 related cluster n=1 Tax=unknown RepID=UPI0003CDDA18 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 285.0
  • Bit_score: 312
  • Evalue 3.30e-82
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY67012.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 285.0
  • Bit_score: 312
  • Evalue 4.70e-82
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 290.0
  • Bit_score: 309
  • Evalue 6.10e-82

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGACCAGGAATATCGACACCGGCCTGCTCAGGGCCTTCATCGCCGTGGCCGAGACGGCGGGGATGACCGCGGCCGCCAACGTGCTCAACCTGACGCAGGCGGCGATCAGCCAGCAGATCAAGCGCCTGGAGGACGGGTTCGAGGCCCGCCTGTTCGAGCGCGACCGCAAGGGGCTGCGCCTGACCAATGCCGGCGAGCGCCTGTTCGGCAAGGCCAAGCGGATGCTGGCGCTCAACGACGAGATCTGGGCCGAGATGACGGTGCCGATCCACAGCGGCGAGGTCCGCCTCGGCATCCCCTACGACCTGGTCAACACCTATCTGCCGCCGGTGCTGCGCGGCTTCTCCCGCGCCTATCCCAATGTGCGGGTGACGCTGGTGTGCGAGCCGTCGCTGAAGCTCCTGGAGACGCTGCAGGCCGGCCAGATCGACCTCACCCTGGTCGAGCAGCCGCAGGCCAGCGCGGGCGCCGAGACCCTGGCGATCGACCGCCTGGTCTGGGTCGGCGCCCGCGGCGGCGAGGCCCACCGCAAGCGGCCGCTGCCGGTGTCGCTCGGGGCCGAGACCTGCATCTTCCGCCCCGCCATCGTCGCGGCCCTCGCCGGCGCGGACATCTCCTGGTGGGCGATGTCGGAGATCGGCGGCGCCGAGGTGATGAACGCCACCGTCGAGACCGACCTGGCGGTGATGGCGCTGATGGCCGCCACCGTCCCGGGGCATCTGGAGATCCTCGGGCCGCAATCCGGCCTGCCGCCGCTGCAGCCCTACTCGATCGCGCTGCACATGTCGCGCGCCCGGCCGAGCGCCGTCGTCGAGGAGCTGGCGCGCTTCATCCGCGACGGGTTCCGCAGCCGCCAGCGCCAGGCCGCCTGA
PROTEIN sequence
Length: 291
MTRNIDTGLLRAFIAVAETAGMTAAANVLNLTQAAISQQIKRLEDGFEARLFERDRKGLRLTNAGERLFGKAKRMLALNDEIWAEMTVPIHSGEVRLGIPYDLVNTYLPPVLRGFSRAYPNVRVTLVCEPSLKLLETLQAGQIDLTLVEQPQASAGAETLAIDRLVWVGARGGEAHRKRPLPVSLGAETCIFRPAIVAALAGADISWWAMSEIGGAEVMNATVETDLAVMALMAATVPGHLEILGPQSGLPPLQPYSIALHMSRARPSAVVEELARFIRDGFRSRQRQAA*