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berkeley_reactor_200306_biofilm_scaffold_154490_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19954..20700

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 246.0
  • Bit_score: 371
  • Evalue 5.60e-100
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZAD4_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 246.0
  • Bit_score: 362
  • Evalue 2.40e-97
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 246.0
  • Bit_score: 362
  • Evalue 6.80e-98

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGATCCTCTATCCCGCGATCGATCTGAAGGAAGGGCGCTGCGTCCGTCTGGTCCAGGGCGACATGGCCAGGGCCACCGTCTTCAACGACAGCCCGGCCGACCAGGCCCGGGCCTTCCGGGCCATGGGCTTCTCGCATCTGCACGTCGTCGACCTCGACGGCGCCTTCGCCGGCCGGCCGATGAACGCCGCGGCGGTCGAGGCGATCCTCGCCGCCACCGCCATGCCGCTGCAGCTCGGCGGCGGCATCCGCGACATGGCGACCGTCGAGGGCTGGCTCGCCAAGGGCGTCGACCGCGTCATCATCGGCACCGCGGCGGTGCGTGACCCCGCCTTCGTCAAGGCGGCCGCCCGCGCCCATCCCGGCCGCGTCGCCGTCGGCCTCGACGCCCGCGACGGCTGCGTCGCGGTCGAGGGCTGGGCCGAAGCCTCGAGCCTGACGGCGGTCGAGCTTGCCCGCCGCTTCGAGGATGCCGGGGTGAGCGCCATCGTCTATACGAACATCGCCCGCGACGGTATGCTGGGCGGCATCGACTGGGACGGCACGCTGGCGCTCGCCGAGGCCATCCGCATCCCGGTCGTCGCCTCCGGCGGCCTCGCCTCGATCGCGGATGTCGAACGGCTGATGCAGCCGGACGCCGCCAGGCTGGAGGGCGCCATTGCCGGACGGGCCCTCTATGACAGGCGGCTCGATCCGGCGGAGGCGCTGGCGCTGATCGGACGAGGCAGCAGCGAGGCGCGGCCATGA
PROTEIN sequence
Length: 249
VILYPAIDLKEGRCVRLVQGDMARATVFNDSPADQARAFRAMGFSHLHVVDLDGAFAGRPMNAAAVEAILAATAMPLQLGGGIRDMATVEGWLAKGVDRVIIGTAAVRDPAFVKAAARAHPGRVAVGLDARDGCVAVEGWAEASSLTAVELARRFEDAGVSAIVYTNIARDGMLGGIDWDGTLALAEAIRIPVVASGGLASIADVERLMQPDAARLEGAIAGRALYDRRLDPAEALALIGRGSSEARP*