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berkeley_reactor_200306_biofilm_scaffold_154490_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 21652..22434

Top 3 Functional Annotations

Value Algorithm Source
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 257.0
  • Bit_score: 436
  • Evalue 1.50e-119
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYD9_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 257.0
  • Bit_score: 436
  • Evalue 1.10e-119
hisF; imidazole glycerol phosphate synthase subunit HisF similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 257.0
  • Bit_score: 436
  • Evalue 3.00e-120

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCTGAAGGCCCGTGTCATCCCCTGCCTCGACGTCAAGGACGGCCGTGTCGTCAAGGGCGTCAACTTCGTCGACCTCGTCGATGCCGGCGATCCCGTCGCCTGCGCCAGGGCCTATGACGCGGCGGGTGCGGACGAGCTGTGCTTCCTCGACATCAACGCCACCCACGAGAATCGCGGCACCATGTTCGACGTGGTGCGGCGCACGGCGGAGGCCTGCTTCATGCCGCTCACCGTCGGCGGCGGCGTGCGCACGGTCGAGGACATCCGCAACCTCCTGCTGGCGGGCGCCGACAAGGTGTCGATCAACTCGGCCGCGGTGGCGCGTCGGGGCTTCGTCGGCGAGGCGGCGGAAAAGTTCGGCCAGCAATGCATCGTGGTGGCGATCGACGCCAAGAAGGTCTCGGCCGCGGGCGAGCCGGACCGCTGGGAGATCTTCACCCATGGCGGCCGCCGGCCGACCGGCATCGACGCCCTCGAATTCGCCGGCGAGGTGGTGGCGCTCGGCGCCGGCGAGATCCTGCTCACCTCCATGGATCGCGACGGCACCAAGGCCGGCTTCGACATCGCCCTCACCCGCGCCGTGGCCGATGCCGTGCCGGTGCCGGTGATCGCCTCCGGCGGGGTCGGCACGCTCGACCATCTCGTCGACGGCGTGCGCGATGGCCATGCCACGGCGGTGCTCGCCGCCTCGATCTTCCATTTCGGCACCTTCACCATCGGGCAAGCCAAGGCGCACATGGCCGCGGCCGGCCTGCCCATGCGCATGGACCTGGCGGCATGA
PROTEIN sequence
Length: 261
MLKARVIPCLDVKDGRVVKGVNFVDLVDAGDPVACARAYDAAGADELCFLDINATHENRGTMFDVVRRTAEACFMPLTVGGGVRTVEDIRNLLLAGADKVSINSAAVARRGFVGEAAEKFGQQCIVVAIDAKKVSAAGEPDRWEIFTHGGRRPTGIDALEFAGEVVALGAGEILLTSMDRDGTKAGFDIALTRAVADAVPVPVIASGGVGTLDHLVDGVRDGHATAVLAASIFHFGTFTIGQAKAHMAAAGLPMRMDLAA*