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berkeley_reactor_200306_biofilm_scaffold_154490_36

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(31438..32973)

Top 3 Functional Annotations

Value Algorithm Source
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 513.0
  • Bit_score: 620
  • Evalue 1.40e-174
Ribose ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPS7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 513.0
  • Bit_score: 620
  • Evalue 1.00e-174
ABC-type sugar transport system, ATPase component similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 514.0
  • Bit_score: 603
  • Evalue 4.70e-170

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1536
ATGTCATCTCCCCTTCTCTCCCTTTCCGGCTTGTCGAAGCGCTTCCTGGGTGTCCAGGCGCTGGACGATGTCGGCATCTCGGTCCAGCCCGGCGAGGTGCATGGGCTGCTCGGTGAAAACGGAGCCGGCAAATCGACGCTGCTGAAGATCATATCCGGGGCGCAGCCGCCCGACGCCGGAACGATGCTGTGGGACGGCGCTGATATGACGGCGCCCAATCCGCTGGCGGCCCAGGCGCTCGGCATCGTCACGATCTATCAGGAATTCAACCTCGTCCCGACGCTGACGGTGGCCGAGAATATCTTCATCGGCCGCGAGCCGACGCGGATGGGCCTGTTCGTCGATTGGCCGAAGATGCGGTCGATGGCGCGCGAGCAGCTCGATCGCATCGGCCTTGCCATCGACCCGGGGATCCCGGTCTCGGCCCTGTCGGTGGCCGAGCAGCAGATGGTGGAGATCGCCCGCGCGCTGTCGATGAAGGCGCGGCTGGTGGTGATGGACGAGCCGACCTCGGCGCTCACCGAGACCGAGGTCGAGCGGCTGATCGCGATCATGCGCCAATTGCGTGACGAGGGAGTCAGCATCCTGTTCGTCACCCACCGCCTGGAAGAGGCCATGCAGATCTGCGACCGCTTCACGGTGCTGCGCGACGGCAAGCTCGCCGGGGTGCGCGAGCGGCGCGGGCTCACCATCCCGCAGATCATCGAGCTGATGGTCGGCAGGTCCGCATCGGATCTCTATCGCCGCCCCGAGCGCCGGCACGAGGCCGGCGCGGTCCGCCTGTCGACGCGCGACCTGTCGACGGCCAGATCCGGCCGCCGCAGCCATGGCACGGTGTTGCGCGGCATCAATCTCGACGTGCGGGCCGGTGAGATTCTGGGGATCGCCGGCCTGGTAGGGGCGGGGCGCACCGAATTCGCCCGGGCCGTGTTCGGCGCCGATCCGCTGGCCGCGGGCGAAATCCGCATCGACGGCCGGCCGGCTTCCATCCGCTCGCCGCGCGACGCGATCCGCCATGGCATCGGCCTCGTCCCCGAGGACCGCAAGCAGCAGGCGCTGTTCCTCGATCTCGCCATTCGCCAGAATTTTTCGATCGCCGGACTGGAGCGCTTTTCCACTCTCGGCGTTTTCGTCGACGAGGCCGCCGAAGGGCGGGCGCTCGACGGCTTTCGCCGGTCGATGCACGTGCGCATGCGCGATCCCGGCCAGCGGGTCGGGGCCTTGTCGGGCGGCAACCAGCAGAAGATCGTGCTGGCGCGCTGGCTGCAGCTGGAGCCGAAGATCTTGATCGTCGACGAGCCGACGCGCGGCGTCGACATCGGCGCCAAGGCCGAGGTGCACGAATTGCTCGACCAGCTCGCCGCGCGCGGTGTCGCGGTCATCGCGATCTCGTCCGATCTGCCCGAGGTGATGGCGATCTCAGACCGGATCGTCACCATGCGAGCCGGACGGATCACCGGCGAAGTGTCGGCCAATGACGCCACCCAAGAGCGGCTGATGACCTTGATGACCCTCGAACAGCGCGACGCGGCCTGA
PROTEIN sequence
Length: 512
MSSPLLSLSGLSKRFLGVQALDDVGISVQPGEVHGLLGENGAGKSTLLKIISGAQPPDAGTMLWDGADMTAPNPLAAQALGIVTIYQEFNLVPTLTVAENIFIGREPTRMGLFVDWPKMRSMAREQLDRIGLAIDPGIPVSALSVAEQQMVEIARALSMKARLVVMDEPTSALTETEVERLIAIMRQLRDEGVSILFVTHRLEEAMQICDRFTVLRDGKLAGVRERRGLTIPQIIELMVGRSASDLYRRPERRHEAGAVRLSTRDLSTARSGRRSHGTVLRGINLDVRAGEILGIAGLVGAGRTEFARAVFGADPLAAGEIRIDGRPASIRSPRDAIRHGIGLVPEDRKQQALFLDLAIRQNFSIAGLERFSTLGVFVDEAAEGRALDGFRRSMHVRMRDPGQRVGALSGGNQQKIVLARWLQLEPKILIVDEPTRGVDIGAKAEVHELLDQLAARGVAVIAISSDLPEVMAISDRIVTMRAGRITGEVSANDATQERLMTLMTLEQRDAA*