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berkeley_reactor_200306_biofilm_scaffold_157852_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9497..10450

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat, SEL1 subfamily n=1 Tax=Rhodovulum sp. PH10 RepID=J6JCF9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 315.0
  • Bit_score: 263
  • Evalue 2.00e-67
TPR repeat, SEL1 subfamily {ECO:0000313|EMBL:EJW12920.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 315.0
  • Bit_score: 263
  • Evalue 2.70e-67
Sel1 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 300.0
  • Bit_score: 250
  • Evalue 3.70e-64

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGAGGCGGCTTGCGATCGCAATCGTCCTGGGGCTCGCCGCGTGGCCGGCCGCGGCGGCGGCGGACAAGCCGGCGGCCGAGGCCAAGCCGGTGTTCCCGCCGATCGCGCCGCCGGTCGACAGCAGCAAGGTCGACCTTGCCTTCGGCGCCTTCCAGCGCGGCTACTACCTCACCGCCTTCGACGAGGCGACCAAGCGGGTGGAGGAGAAGCAGGACCCGGTGGCGATGACGCTGCTCGGCCAGCTCTATGCCGAAGGGCTCGGCGTGCCGCGCGACCCGGCCAAGGCAGCCTCCTGGTACGGGCTGGCAGCCCAGCGCGGCAACCGCGACGCCATCTTCGCCTATGGCATGGCCAAGGTGACCGGCAGCGGCGTGCCGAAGGACGAGACCGGCGGGATCCTGCTGCTCAACAAGGCGGCCTCGATGAAGGTGATGGCCGCCTCGTACAATCTCGGCATCCTGGCGCTTCGGCCGGTCAACGGCGCTCCCGACTTCGCCACCGCCCTGCAACGCTTCCGCGAGGCGGCGGACGAGGGCAGCGCCGACGCCGAATATTCGCTGGGCGTGCTGGCCAAGGAGGGCAAGGGCATGCCGGTCGATGCCAAGGCTGCGGCCGGCTATTTCCTCGCCGCGGCGCAGGACGGCAATGTCGACGCCATGGTGGAGACGGCCATCGCCCTCTACAACGGCGACGGCGTCCCGCGCGACGAGAAGGCCGCGGCGCTCTGGTTCCGCCGCGCGGCGGAGGCGGGCTCGCCGATCGGCCGCAACCGCCTGGCCCGGCTCTATGCCTCCGGCCAGGGCGTCGACAAGGACCCGAAGATGGCGGGCATGTGGAACCTGATGGCGCAGGCCGCCGGCCTCAGGGATCCCTGGCTCGACGACTTCATGGCCGGGCAGTCGCAGGCCGTGCGCGACGCCGCGCTCAAGGCGGCGCAGGATCACGGGCTGTAG
PROTEIN sequence
Length: 318
MRRLAIAIVLGLAAWPAAAAADKPAAEAKPVFPPIAPPVDSSKVDLAFGAFQRGYYLTAFDEATKRVEEKQDPVAMTLLGQLYAEGLGVPRDPAKAASWYGLAAQRGNRDAIFAYGMAKVTGSGVPKDETGGILLLNKAASMKVMAASYNLGILALRPVNGAPDFATALQRFREAADEGSADAEYSLGVLAKEGKGMPVDAKAAAGYFLAAAQDGNVDAMVETAIALYNGDGVPRDEKAAALWFRRAAEAGSPIGRNRLARLYASGQGVDKDPKMAGMWNLMAQAAGLRDPWLDDFMAGQSQAVRDAALKAAQDHGL*