ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_157852_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11968..12687)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E63D68 similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 240.0
  • Bit_score: 413
  • Evalue 1.10e-112
Chemotaxis protein CheY {ECO:0000313|EMBL:KGM34261.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 237.0
  • Bit_score: 407
  • Evalue 1.20e-110
ompR-2; transcriptional regulatory protein OmpR 2 similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 237.0
  • Bit_score: 382
  • Evalue 4.70e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGAACCCGCACCGCACATCGCCATCGTCGACGATCACCGCGACATCCGCGACCTCGTCGGCAAATATCTCGCCCAGCACGGCTATCGCATCAGCACCGCCGAGAACGGGGCGGCGCTGCGCCGGCTGCTCGAAGCCGGCGCGCCGGACCTGGTGGTCCTCGACGTGATGATGCCGGGCGAGGACGGCCTCTCGCTGTGCCGCCACATCCGGGGCACCACCAACCTGCCGATCATCTTCCTCACCGCCATGGTCGAGGACACCGACCGCATCATCGGGCTCGAGATCGGCGCCGACGACTACCTGACCAAGCCGTTCAACCCGCGCGAGCTGCTCGCCCGCATCAAGGCGGTGCTGCGGCGCGTCAACAGCCTGCCGCCGCAGCGCGACAAGCTGAAGGCCAGGGCGCTGCGGTTCGAGCATTGGCTGCTCCATGTCGGCCGGCGCGAGCTCGTCGGCGCCGACGGCACCGCCGTCGCCCTGAGCACGGCGGAGTTCCGCCTGCTCAAGGCCCTCATCGACCATGCCGGGCTGGTGCTGAGCCGCGACCAGCTCCTCGACCTCACCGTCGGGCGCGCCGCCGACAGCTTCGACCGCAGCATCGACAACCAGGTCAGCCGCCTGCGCAAGAAGATCGAGGTCGATCCGCGCAATCCCATGCTGATCAAGACCCATTGGGGTGGCGGCTACAGCTTCGCCGCCGAGGTCCGGGAAGCATGA
PROTEIN sequence
Length: 240
MEPAPHIAIVDDHRDIRDLVGKYLAQHGYRISTAENGAALRRLLEAGAPDLVVLDVMMPGEDGLSLCRHIRGTTNLPIIFLTAMVEDTDRIIGLEIGADDYLTKPFNPRELLARIKAVLRRVNSLPPQRDKLKARALRFEHWLLHVGRRELVGADGTAVALSTAEFRLLKALIDHAGLVLSRDQLLDLTVGRAADSFDRSIDNQVSRLRKKIEVDPRNPMLIKTHWGGGYSFAAEVREA*